RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 GABRQQ9UN88 632 aa11.35□□□□□ -0.59
LINCR-0001-201ENST00000517732 SLC45A1Q9Y2W3 748 aa11.35□□□□□ -0.59
LINCR-0001-201ENST00000517732 DAGLAQ9Y4D2 1042 aa11.35□□□□□ -0.59
LINCR-0001-201ENST00000517732 UTYO14607 1347 aa11.35□□□□□ -0.59
LINCR-0001-201ENST00000517732 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 ELNP15502 786 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 IRF5Q13568 498 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 MOGSQ13724 837 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 CDC42EP5Q6NZY7 148 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 USP40Q9NVE5 1235 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
LINCR-0001-201ENST00000517732 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 A0A0G2JLL6 359 aaPredicted RBP11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 NFIAQ12857 509 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 GPAT2Q6NUI2 795 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 PRRT2Q7Z6L0 340 aaPredicted RBP11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 LPIN2Q92539 896 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
LINCR-0001-201ENST00000517732 LOC285556D6RIA3 1793 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 PTPRAP18433 802 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 FGFR2P21802 821 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 ZGPATQ8N5A5 531 aaKnown RBP11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 ANKRD44Q8N8A2 993 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 SZT2Q5T011 3432 aa11.32□□□□□ -0.6
LINCR-0001-201ENST00000517732 EYA2O00167 538 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 SOX1O00570 391 aaPredicted RBP11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 ENTPD3O75355 529 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 PRDX5P30044 214 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 RGS3P49796 1198 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 C7orf61Q8IZ16 206 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 SALL1Q9NSC2 1324 aa11.31□□□□□ -0.6
LINCR-0001-201ENST00000517732 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 SEMA3EO15041 775 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 HMGCRP04035 888 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 BMP8BP34820 402 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 PABPC4Q13310 644 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 AFG3L2Q9Y4W6 797 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 PTPRCP08575 1304 aa11.3□□□□□ -0.6
LINCR-0001-201ENST00000517732 PHF20L1A8MW92 1017 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 ATP2B3Q16720 1220 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 DEFB123Q8N688 67 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 GDF15Q99988 308 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 ZMYND8Q9ULU4 1186 aaPredicted RBP11.29□□□□□ -0.6
LINCR-0001-201ENST00000517732 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 PICALMQ13492 652 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
LINCR-0001-201ENST00000517732 LRIT3Q3SXY7 679 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 GAKO14976 1311 aa11.27□□□□□ -0.61
LINCR-0001-201ENST00000517732 DDTLA6NHG4 134 aaPredicted RBP11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 CIAO1O76071 339 aa11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 SYN1P17600 705 aa11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 BTDP43251 543 aa11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 MAP3K10Q02779 954 aa11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 MRPL50Q8N5N7 158 aaKnown RBP11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
LINCR-0001-201ENST00000517732 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms