RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
TRAPPC9-203ENST00000517667 ELNP15502 786 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 BMP8BP34820 402 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 DIXDC1Q155Q3 683 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 COA7Q96BR5 231 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 LRCH3Q96II8 777 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 FAM198AQ9UFP1 575 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 ZHX2Q9Y6X8 837 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 MYH2Q9UKX2 1941 aa14.35□□□□□ -0.11
TRAPPC9-203ENST00000517667 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 PTPRAP18433 802 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 GADL1Q6ZQY3 521 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 USP40Q9NVE5 1235 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
TRAPPC9-203ENST00000517667 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 ENTPD3O75355 529 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 PRDX5P30044 214 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 CCDC184Q52MB2 194 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 PAWRQ96IZ0 340 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 GNL3LQ9NVN8 582 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 LRRFIP2Q9Y608 721 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 SALL1Q9NSC2 1324 aa14.33□□□□□ -0.12
TRAPPC9-203ENST00000517667 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 EYA2O00167 538 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 GDF15Q99988 308 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-203ENST00000517667 SEMA3EO15041 775 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 HMGCRP04035 888 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 RGS3P49796 1198 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 RFX7Q2KHR2 1363 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 DOCK3Q8IZD9 2030 aa14.31□□□□□ -0.12
TRAPPC9-203ENST00000517667 ATAD5Q96QE3 1844 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 SLF2Q8IX21 1173 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 ANKRD13CQ8N6S4 541 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 PROCA1Q8NCQ7 364 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 DENND2AQ9ULE3 1009 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 PTPRCP08575 1304 aa14.3□□□□□ -0.12
TRAPPC9-203ENST00000517667 ZBTB22O15209 634 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 MRS2Q9HD23 443 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 STXBP5LQ9Y2K9 1186 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 GAKO14976 1311 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 RPTORQ8N122 1335 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 UNC80Q8N2C7 3258 aa14.29□□□□□ -0.12
TRAPPC9-203ENST00000517667 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 TBC1D2Q9BYX2 928 aa14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-203ENST00000517667 CIAO1O76071 339 aa14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 RFX5P48382 616 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 C11orf49Q9H6J7 331 aa14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 ZMYND8Q9ULU4 1186 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-203ENST00000517667 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 TBC1D12O60347 775 aa14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 TREML2Q5T2D2 321 aa14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 CEP126Q9P2H0 1117 aa14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 PLXNB2O15031 1838 aa14.26□□□□□ -0.13
TRAPPC9-203ENST00000517667 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 PICALMQ13492 652 aa14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 SPTY2D1Q68D10 685 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 MRPL50Q8N5N7 158 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 OSBPL5Q9H0X9 879 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-203ENST00000517667 MROH7-TTC4A0A0A0MT08 1334 aa14.24□□□□□ -0.13
TRAPPC9-203ENST00000517667 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-203ENST00000517667 SYN1P17600 705 aa14.24□□□□□ -0.13
TRAPPC9-203ENST00000517667 BTDP43251 543 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms