RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 REXO1Q8N1G1 1221 aaKnown RBP4.89□□□□□ -1.63
SKP1-203ENST00000517625 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 DCAF5Q96JK2 942 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 YIPF2Q9BWQ6 316 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 ACBD3Q9H3P7 528 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 GSX1Q9H4S2 264 aaPredicted RBP4.89□□□□□ -1.63
SKP1-203ENST00000517625 CAPN10Q9HC96 672 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 STRIP2Q9ULQ0 834 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 PCDHA4Q9UN74 947 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 PCDHB5Q9Y5E4 795 aa4.89□□□□□ -1.63
SKP1-203ENST00000517625 FANCGO15287 622 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 TMPRSS2O15393 492 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 DLGAP3O95886 979 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 IMPDH2P12268 514 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 FAM160A1Q05DH4 1040 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 SOX4Q06945 474 aaPredicted RBP4.88□□□□□ -1.63
SKP1-203ENST00000517625 PDE4BQ07343 736 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 NAALADL2Q58DX5 795 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 SHISA2Q6UWI4 295 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 BNC2Q6ZN30 1099 aaPredicted RBP4.88□□□□□ -1.63
SKP1-203ENST00000517625 CYFIP1Q7L576 1253 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 KCT2Q8NC54 265 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 WFDC12Q8WWY7 111 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 ELMO3Q96BJ8 720 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 GMLQ99445 158 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 CRIM1Q9NZV1 1036 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 PRR36Q9H6K5 1346 aa4.88□□□□□ -1.63
SKP1-203ENST00000517625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 SART1O43290 800 aaKnown RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 LIG1P18858 919 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 ZNF165P49910 485 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 RING1Q06587 406 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 WIPI1Q5MNZ9 446 aaPredicted RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 DZIP1LQ8IYY4 767 aaKnown RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 NKD1Q969G9 470 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 ARMC5Q96C12 935 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 FAM46AQ96IP4 442 aaKnown RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 EAF1Q96JC9 268 aaPredicted RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 ZC3H12CQ9C0D7 883 aaKnown RBP4.87□□□□□ -1.63
SKP1-203ENST00000517625 ADAM30Q9UKF2 790 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 AP4E1Q9UPM8 1137 aa4.87□□□□□ -1.63
SKP1-203ENST00000517625 KRBA1A5PL33 1030 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 F6X3S4 739 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 GFRA2O00451 464 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 GAS2O43903 313 aaKnown RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 ATE1O95260 518 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 GLB1P16278 677 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 NOS3P29474 1203 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 SOX9P48436 509 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 RASSF7Q02833 373 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 ARID5AQ03989 594 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 PTPN11Q06124 597 aaPredicted RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 MLECQ14165 292 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 AKAP4Q5JQC9 854 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 C12orf50Q8NA57 414 aaPredicted RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 C2CD4AQ8NCU7 369 aaPredicted RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 RNF214Q8ND24 703 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 JARID2Q92833 1246 aaPredicted RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 WDR89Q96FK6 387 aaPredicted RBP4.86□□□□□ -1.63
SKP1-203ENST00000517625 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 EHMT1Q9H9B1 1298 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 UBP1Q9NZI7 540 aa4.86□□□□□ -1.63
SKP1-203ENST00000517625 ATF4P18848 351 aaPredicted RBP4.85□□□□□ -1.63
SKP1-203ENST00000517625 CAP2P40123 477 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 CRKP46108 304 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 PREPP48147 710 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 IREB2P48200 963 aaKnown RBP4.85□□□□□ -1.63
SKP1-203ENST00000517625 LRRFIP1Q32MZ4 808 aaKnown RBP4.85□□□□□ -1.63
SKP1-203ENST00000517625 TMEM201Q5SNT2 666 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 ZBTB37Q5TC79 503 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 MPRIPQ6WCQ1 1025 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 AGGF1Q8N302 714 aaeCLIP4.85□□□□□ -1.63
SKP1-203ENST00000517625 SREK1Q8WXA9 508 aaKnown RBP4.85□□□□□ -1.63
SKP1-203ENST00000517625 MYRFLQ96LU7 910 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 SSBP4Q9BWG4 385 aaPredicted RBP4.85□□□□□ -1.63
SKP1-203ENST00000517625 WNT10AQ9GZT5 417 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 PIDD1Q9HB75 910 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 PPP1R9AQ9ULJ8 1098 aa4.85□□□□□ -1.63
SKP1-203ENST00000517625 C1QTNF9BB2RNN3 333 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 CHRNA4P43681 627 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 GATA4P43694 442 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 MAP7Q14244 749 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 SEZ6Q53EL9 994 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.84□□□□□ -1.63
SKP1-203ENST00000517625 CD163Q86VB7 1156 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 TMEM151AQ8N4L1 468 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 OR6P1Q8NGX9 317 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 ZNF507Q8TCN5 953 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 EZH1Q92800 747 aaPredicted RBP4.84□□□□□ -1.63
SKP1-203ENST00000517625 UTP4Q969X6 686 aaKnown RBP4.84□□□□□ -1.63
SKP1-203ENST00000517625 ACSS3Q9H6R3 686 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 PICK1Q9NRD5 415 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 DISC1Q9NRI5 854 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 ZNRF3Q9ULT6 936 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 ACTL7BQ9Y614 415 aa4.84□□□□□ -1.63
SKP1-203ENST00000517625 MEIS3P2A8K0S8 358 aa4.83□□□□□ -1.64
SKP1-203ENST00000517625 DCDC2CA8MYV0 355 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms