RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CELF2-AS1Q8N7Q2 184 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 CPLX3Q8WVH0 158 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 IRF7Q92985 503 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 WNT8BQ93098 351 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 PLPPR2Q96GM1 343 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 OSGEPQ9NPF4 335 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 PRDM6Q9NQX0 595 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 DNAJA2O60884 412 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 BCRP11274 1271 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 RAB33AQ14088 237 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 RUFY4Q6ZNE9 571 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 CKAP2LQ8IYA6 745 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 REXO1Q8N1G1 1221 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 TNKS2Q9H2K2 1166 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 PCDHA4Q9UN74 947 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 PCDHGC5Q9Y5F6 944 aa8.02□□□□□ -1.13
CTNNA1-202ENST00000517533 DGKGP49619 791 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 TCEAL1Q15170 157 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 WIPI1Q5MNZ9 446 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 FBXW10Q5XX13 1052 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 SCARA3Q6AZY7 606 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 JAZF1Q86VZ6 243 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 SLC16A10Q8TF71 515 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 FERD3LQ96RJ6 166 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
CTNNA1-202ENST00000517533 FAM221BA6H8Z2 402 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 ATE1O95260 518 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 BPNT1O95861 308 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 CYP11A1P05108 521 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 ZNF165P49910 485 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 ZNF746Q6NUN9 644 aaPredicted RBP8□□□□□ -1.13
CTNNA1-202ENST00000517533 DDX54Q8TDD1 881 aaKnown RBP8□□□□□ -1.13
CTNNA1-202ENST00000517533 UBASH3BQ8TF42 649 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 USP26Q9BXU7 913 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 KRT82Q9NSB4 513 aa8□□□□□ -1.13
CTNNA1-202ENST00000517533 DCDC2CA8MYV0 355 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 K7ELQ4 463 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 WISP1O95388 367 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 RASA3Q14644 834 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 SUZ12Q15022 739 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 PTPROQ16827 1216 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 SOGA3Q5TF21 947 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 NBPF6Q5VWK0 638 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 FAM117BQ6P1L5 589 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 RBBP8NLQ8NC74 664 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 NBPF4Q96M43 638 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 CSADQ9Y600 493 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 PRR36Q9H6K5 1346 aa7.99□□□□□ -1.13
CTNNA1-202ENST00000517533 HTR3BO95264 441 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 ARL4DP49703 201 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 KIF4BQ2VIQ3 1234 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 CYFIP1Q7L576 1253 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 C12orf40Q86WS4 652 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 TRIM11Q96F44 468 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 ACSBG1Q96GR2 724 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 WDR18Q9BV38 432 aa7.98□□□□□ -1.13
CTNNA1-202ENST00000517533 RING1Q06587 406 aa7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 ZC3H12AQ5D1E8 599 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 ZNF385CQ66K41 422 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 ST7Q9NRC1 585 aa7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 SNTG2Q9NY99 539 aa7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 KLHL42Q9P2K6 505 aa7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 SUGT1Q9Y2Z0 365 aa7.97□□□□□ -1.13
CTNNA1-202ENST00000517533 AMPD1P23109 780 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 CD68P34810 354 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 SNRPNP63162 240 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 IGBP1P78318 339 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 SLC52A1Q9NWF4 448 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 REV1Q9UBZ9 1251 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 MSRB2Q9Y3D2 182 aa7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 MRPL42Q9Y6G3 142 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-202ENST00000517533 hCG_2014768A0A024R1R8 64 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 B2RBV5 119 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 DLL1O00548 723 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 AOC2O75106 756 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 ACRP10323 421 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 NTF4P34130 210 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 ZYXQ15942 572 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 LINC00114Q6XXX2 140 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 MKL1Q969V6 931 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 KANSL2Q9H9L4 492 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 SIRPGQ9P1W8 387 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 SNCAIPQ9Y6H5 919 aa7.95□□□□□ -1.14
CTNNA1-202ENST00000517533 A0A0A0MRY4 1105 aa7.94□□□□□ -1.14
CTNNA1-202ENST00000517533 A0A1W2PQH9 124 aa7.94□□□□□ -1.14
CTNNA1-202ENST00000517533 DDR2Q16832 855 aa7.94□□□□□ -1.14
CTNNA1-202ENST00000517533 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms