RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 IDH1O75874 414 aaKnown RBP17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 SH3RF3Q8TEJ3 882 aaPredicted RBP17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 R3HDMLQ9H3Y0 253 aa17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
PDGFRB-202ENST00000517488 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 SPDYE5A6NIY4 337 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 IGF2BP3O00425 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 INHBEP58166 350 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 PPP4CP60510 307 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 MS4A4AQ96JQ5 239 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 PTPN18Q99952 460 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
PDGFRB-202ENST00000517488 AKAP11Q9UKA4 1901 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 IGSF3O75054 1194 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 BAG3O95817 575 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 CYP7A1P22680 504 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 MAGEB6Q8N7X4 407 aa17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
PDGFRB-202ENST00000517488 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 DYNLL1P63167 89 aaKnown RBP17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 MAP3K10Q02779 954 aa17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 BRI3BPQ8WY22 251 aa17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 OSBPL5Q9H0X9 879 aaPredicted RBP17.17■□□□□ 0.34
PDGFRB-202ENST00000517488 GOLIM4O00461 696 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 IRF6O14896 467 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 CFHR5Q9BXR6 569 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
PDGFRB-202ENST00000517488 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 CCL15-CCL14A0A0B4J2E2 113 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 GPR25O00155 361 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 CAPN15O75808 1086 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 ALDH1A1P00352 501 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 PLCG2P16885 1265 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 ATP5JP18859 108 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 GTF2A2P52657 109 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 PPIL2Q13356 520 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 CCL15Q16663 113 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 NOL9Q5SY16 702 aaKnown RBP17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 MAPKAPK5Q8IW41 473 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
PDGFRB-202ENST00000517488 FAM196BA6NMK8 535 aa17.14■□□□□ 0.33
PDGFRB-202ENST00000517488 PPATQ06203 517 aa17.14■□□□□ 0.33
PDGFRB-202ENST00000517488 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
PDGFRB-202ENST00000517488 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
PDGFRB-202ENST00000517488 CASP8AP2Q9UKL3 1982 aa17.14■□□□□ 0.33
PDGFRB-202ENST00000517488 TBC1D12O60347 775 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 PDE6AP16499 860 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 DGKZQ13574 1117 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 HAUS7Q99871 368 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 FLT1P17948 1338 aa17.13■□□□□ 0.33
PDGFRB-202ENST00000517488 CETPP11597 493 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 CRHR2Q13324 411 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 SCYL3Q8IZE3 742 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 ABHD8Q96I13 439 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 COL2A1P02458 1487 aaPredicted RBP17.12■□□□□ 0.33
PDGFRB-202ENST00000517488 BTBD19C9JJ37 291 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 RRP1BQ14684 758 aaKnown RBP17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 TMED8Q6PL24 325 aaPredicted RBP17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 SAP30BPQ9UHR5 308 aaKnown RBP17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 KCNH4Q9UQ05 1017 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 ZHX2Q9Y6X8 837 aa17.11■□□□□ 0.33
PDGFRB-202ENST00000517488 TCRBV5S4A2TA0A5A2 114 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 CTNND1O60716 968 aaKnown RBP17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 FKTNO75072 461 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 PTPRAP18433 802 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 CCDC84Q86UT8 332 aaPredicted RBP17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 ECHDC1Q9NTX5 307 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
PDGFRB-202ENST00000517488 ZNF532Q9HCE3 1301 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms