RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FGD1P98174 961 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 TBC1D32Q96NH3 1257 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 PCDHB5Q9Y5E4 795 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 F6X3S4 739 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 TRIM37O94972 964 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 HOXA10P31260 410 aaPredicted RBP9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 INPP5AQ14642 412 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 XP32Q5T750 250 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 UBE3DQ7Z6J8 389 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 ZAR1Q86SH2 424 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 C12orf40Q86WS4 652 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 GAL3ST3Q96A11 431 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 YIPF2Q9BWQ6 316 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 ATXN3LQ9H3M9 355 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
SCARNA1-201ENST00000517138 LRP8Q14114 963 aa9.3□□□□□ -0.92
SCARNA1-201ENST00000517138 MAP7Q14244 749 aa9.3□□□□□ -0.92
SCARNA1-201ENST00000517138 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
SCARNA1-201ENST00000517138 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
SCARNA1-201ENST00000517138 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
SCARNA1-201ENST00000517138 SORBS3O60504 671 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 NTF4P34130 210 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 CD97P48960 835 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 MFAP1P55081 439 aaKnown RBP9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 CDK5R2Q13319 367 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 LRRC14Q15048 493 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 ISL2Q96A47 359 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 VTI1BQ9UEU0 232 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 TLR6Q9Y2C9 796 aa9.29□□□□□ -0.92
SCARNA1-201ENST00000517138 USP31Q70CQ4 1352 aa9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 ERVK-24P63145 666 aa9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 SEPT6Q14141 434 aa9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 TAF1CQ15572 869 aaPredicted RBP9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 LRFN4Q6PJG9 635 aa9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
SCARNA1-201ENST00000517138 LIG3P49916 1009 aa9.27□□□□□ -0.93
SCARNA1-201ENST00000517138 RING1Q06587 406 aa9.27□□□□□ -0.93
SCARNA1-201ENST00000517138 ZNF765Q7L2R6 523 aa9.27□□□□□ -0.93
SCARNA1-201ENST00000517138 RNF214Q8ND24 703 aa9.27□□□□□ -0.93
SCARNA1-201ENST00000517138 TFE3P19532 575 aaPredicted RBP9.26□□□□□ -0.93
SCARNA1-201ENST00000517138 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
SCARNA1-201ENST00000517138 OSBPL1AQ9BXW6 950 aa9.26□□□□□ -0.93
SCARNA1-201ENST00000517138 MRS2Q9HD23 443 aa9.26□□□□□ -0.93
SCARNA1-201ENST00000517138 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
SCARNA1-201ENST00000517138 ADAMTS4O75173 837 aa9.25□□□□□ -0.93
SCARNA1-201ENST00000517138 AGMOQ6ZNB7 445 aa9.25□□□□□ -0.93
SCARNA1-201ENST00000517138 CRELD1Q96HD1 420 aa9.25□□□□□ -0.93
SCARNA1-201ENST00000517138 PIM2Q9P1W9 311 aa9.25□□□□□ -0.93
SCARNA1-201ENST00000517138 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
SCARNA1-201ENST00000517138 COBLO75128 1261 aa9.24□□□□□ -0.93
SCARNA1-201ENST00000517138 LEFTY1O75610 366 aa9.24□□□□□ -0.93
SCARNA1-201ENST00000517138 ST13P50502 369 aaKnown RBP9.24□□□□□ -0.93
SCARNA1-201ENST00000517138 PCMTD2Q9NV79 361 aa9.24□□□□□ -0.93
SCARNA1-201ENST00000517138 ZNF16P17020 682 aaPredicted RBP9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 RPS26P62854 115 aaKnown RBP9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 MRPL58Q14197 206 aaKnown RBP9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 ELMO3Q96BJ8 720 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 PSMG3-AS1Q96PY0 264 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 SSU72Q9NP77 194 aaKnown RBP9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 PCOLCE2Q9UKZ9 415 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 LEMD3Q9Y2U8 911 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 U3KQE9 123 aa9.23□□□□□ -0.93
SCARNA1-201ENST00000517138 PRAMEF27A3QJZ7 478 aa9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 KIAA1324LA8MWY0 1029 aaPredicted RBP9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 FAM87AP0C7U9 286 aa9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 HNRNPUQ00839 825 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 WIPI1Q5MNZ9 446 aaPredicted RBP9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 CYFIP1Q7L576 1253 aa9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■□□□□ 10.2
SCARNA1-201ENST00000517138 PHC3Q8NDX5 983 aa9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 NOC4LQ9BVI4 516 aaKnown RBP9.22□□□□□ -0.93
SCARNA1-201ENST00000517138 SPINK2P20155 84 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 JARID2Q92833 1246 aaPredicted RBP9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 FBRSQ9HAH7 460 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 LRRC4CQ9HCJ2 640 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 PICK1Q9NRD5 415 aa9.21□□□□□ -0.94
SCARNA1-201ENST00000517138 FOSL1P15407 271 aa9.2□□□□□ -0.94
SCARNA1-201ENST00000517138 ZNF326Q5BKZ1 582 aaKnown RBP9.2□□□□□ -0.94
SCARNA1-201ENST00000517138 LDLRAD1Q5T700 205 aa9.2□□□□□ -0.94
SCARNA1-201ENST00000517138 GIMAP7Q8NHV1 300 aa9.2□□□□□ -0.94
SCARNA1-201ENST00000517138 GFRA2O00451 464 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 CYP26A1O43174 497 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 MSMPQ1L6U9 139 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 DTX1Q86Y01 620 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 TOP6BLQ8N6T0 577 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 METTL22Q9BUU2 404 aaPredicted RBP9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
SCARNA1-201ENST00000517138 COPRSQ9NQ92 184 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms