RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 LEFTY1O75610 366 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 FAM87AP0C7U9 286 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 GNA15P30679 374 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 PTPN11Q06124 597 aaPredicted RBP4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 PPM1JQ5JR12 505 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 DUSP27Q5VZP5 1158 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 PCNX4Q63HM2 1172 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 OGFOD3Q6PK18 319 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 DNAJC14Q6Y2X3 702 aaPredicted RBP4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 NFXL1Q6ZNB6 911 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 UBE3DQ7Z6J8 389 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 C12orf40Q86WS4 652 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 NPAS4Q8IUM7 802 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 ACSBG1Q96GR2 724 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 METTL22Q9BUU2 404 aaPredicted RBP4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 CEP44Q9C0F1 390 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 CCDC39Q9UFE4 941 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 ZC3H7BQ9UGR2 993 aaKnown RBP4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 U3KQE9 123 aa4.12□□□□□ -1.75
RN7SKP49-201ENST00000516675 PRPF40AO75400 957 aaKnown RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 WNT11O96014 354 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 EIF4BP23588 611 aaKnown RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 NTF4P34130 210 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 TAGLNQ01995 201 aaKnown RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 EAPPQ56P03 285 aaPredicted RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 LLGL2Q6P1M3 1020 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 ISL2Q96A47 359 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 FAM161BQ96MY7 647 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 PSMG3-AS1Q96PY0 264 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 PCDHA4Q9UN74 947 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 TTF2Q9UNY4 1162 aaKnown RBP4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 SAMM50Q9Y512 469 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 AK5Q9Y6K8 562 aa4.11□□□□□ -1.75
RN7SKP49-201ENST00000516675 RBAK-RBAKDNI3L0D1 243 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 TRIM37O94972 964 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 CDK8P49336 464 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 ERVK-24P63145 666 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 CYP27A1Q02318 531 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 INPP5AQ14642 412 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 CPSF6Q16630 551 aaKnown RBP eCLIP4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 MEI1Q5TIA1 1274 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 FAM181AQ8N9Y4 354 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 RNF214Q8ND24 703 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 ANKRD24Q8TF21 1146 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 GZF1Q9H116 711 aaPredicted RBP4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 SSU72Q9NP77 194 aaKnown RBP4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 PCOLCE2Q9UKZ9 415 aa4.1□□□□□ -1.75
RN7SKP49-201ENST00000516675 HNRNPUQ00839 825 aaKnown RBP eCLIP4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 RING1Q06587 406 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 COL19A1Q14993 1142 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 LRRC14Q15048 493 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 CCDC85BQ15834 202 aaPredicted RBP4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 MAP3K11Q16584 847 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 ZBTB37Q5TC79 503 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 TTBK2Q6IQ55 1244 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 LRFN4Q6PJG9 635 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 SV2BQ7L1I2 683 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 PLD6Q8N2A8 252 aaKnown RBP4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 FRMD6Q96NE9 622 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 DUSP23Q9BVJ7 150 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 PICK1Q9NRD5 415 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 BSDC1Q9NW68 430 aaPredicted RBP4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 PARP2Q9UGN5 583 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 ANGEL1Q9UNK9 670 aaKnown RBP4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 PCDHB5Q9Y5E4 795 aa4.09□□□□□ -1.75
RN7SKP49-201ENST00000516675 PRAMEF27A3QJZ7 478 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 PRNPP04156 253 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 CTSHP09668 335 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 CYP27C1Q4G0S4 372 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 MCTP1Q6DN14 999 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 ZNF574Q6ZN55 896 aaPredicted RBP4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 FBXO33Q7Z6M2 555 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 ABI1Q8IZP0 508 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 TOP6BLQ8N6T0 577 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 GAL3ST3Q96A11 431 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 ELMO3Q96BJ8 720 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 PLPPR2Q96GM1 343 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 CYP8B1Q9UNU6 501 aa4.08□□□□□ -1.76
RN7SKP49-201ENST00000516675 F6X3S4 739 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 TAL1P17542 331 aaPredicted RBP4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 IRAK1P51617 712 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 DAB2P98082 770 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 BNIP3Q12983 259 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 PSMD2Q13200 908 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 SEPT6Q14141 434 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 CYFIP1Q7L576 1253 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 VSIG10LQ86VR7 867 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 WFDC3Q8IUB2 231 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 TP53INP2Q8IXH6 220 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 HEXIM2Q96MH2 286 aaKnown RBP4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 FBRSQ9HAH7 460 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 PAK6Q9NQU5 681 aaPredicted RBP4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 ADGRE2Q9UHX3 823 aa4.07□□□□□ -1.76
RN7SKP49-201ENST00000516675 COL17A1Q9UMD9 1497 aaPredicted RBP4.06□□□□□ -1.76
RN7SKP49-201ENST00000516675 FANCGO15287 622 aa4.06□□□□□ -1.76
RN7SKP49-201ENST00000516675 CD96P40200 585 aa4.06□□□□□ -1.76
RN7SKP49-201ENST00000516675 WIPI1Q5MNZ9 446 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms