RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 BRPF3Q9ULD4 1205 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LRFN2Q9ULH4 789 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RRP7AQ9Y3A4 280 aaKnown RBP2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BTAF1O14981 1849 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ITGB4P16144 1822 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CNTNAP4Q9C0A0 1308 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FANCIQ9NVI1 1328 aa2.83□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LOC102724428A0A0B4J2F2 783 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BTBD11A6QL63 1104 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KCNQ2O43526 872 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NDUFB5O43674 189 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TRIM37O94972 964 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 F11P03951 625 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PCSK2P16519 638 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BAG6P46379 1132 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EIF1AXP47813 144 aaKnown RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SIK1P57059 783 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EIF4A1P60842 406 aaKnown RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PTSQ03393 145 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SLFN5Q08AF3 891 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DCTN1Q14203 1278 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 C8orf34Q49A92 452 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EFHC2Q5JST6 749 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DUSP27Q5VZP5 1158 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TREML1Q86YW5 311 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZSCAN29Q8IWY8 852 aaPredicted RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CRIPAKQ8N1N5 446 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF280CQ8ND82 737 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF496Q96IT1 587 aaPredicted RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SUSD3Q96L08 255 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CEP63Q96MT8 703 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CAMKK2Q96RR4 588 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 THUMPD2Q9BTF0 503 aaKnown RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TEX13AQ9BXU3 409 aaPredicted RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MBIPQ9NS73 344 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ATG3Q9NT62 314 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZDHHC3Q9NYG2 299 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 GMPR2Q9P2T1 348 aaKnown RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TSPYL4Q9UJ04 414 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ASAP1Q9ULH1 1129 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DYRK1BQ9Y463 629 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 IBTKQ9P2D0 1353 aaPredicted RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 COL5A3P25940 1745 aaPredicted RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TJP1Q07157 1748 aa2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 VIRMAQ69YN4 1812 aaKnown RBP2.82□□□□□ -1.96
SCARNA16.3-201ENST00000516595 H7C1W4 665 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZBTB39O15060 712 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MICAL2O94851 1124 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 APBA3O96018 575 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SNRPA1P09661 255 aaKnown RBP2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CYP19A1P11511 503 aaPredicted RBP2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 IL6STP40189 918 aaPredicted RBP2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZAP70P43403 619 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 HIRAP54198 1017 aaPredicted RBP2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SLC39A6Q13433 755 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TXNRD1Q16881 649 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ALDH1L2Q3SY69 923 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FAM182BQ5T319 152 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FOXR1Q6PIV2 292 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ILDR2Q71H61 639 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PTF1AQ7RTS3 328 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LRP10Q7Z4F1 713 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ATCAYQ86WG3 371 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RGL4Q8IZJ4 473 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CCDC155Q8N6L0 562 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 GPR152Q8TDT2 470 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PIK3R5Q8WYR1 880 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EDEM1Q92611 657 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SYTL4Q96C24 671 aaPredicted RBP2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ACSBG1Q96GR2 724 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MYO19Q96H55 970 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 HSH2DQ96JZ2 352 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZIC5Q96T25 663 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FAM13BQ9NYF5 915 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PXDNLA1KZ92 1463 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 C4BP0C0L5 1744 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 QSER1Q2KHR3 1735 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NUP188Q5SRE5 1749 aa2.81□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KAT6BQ8WYB5 2073 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TAF1LQ8IZX4 1826 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SCN7AQ01118 1682 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ATP10DQ9P241 1426 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 COL15A1P39059 1388 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PTPRCP08575 1304 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KIF16BQ96L93 1317 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CDC14CA4D256 554 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ANKRD33BA6NCL7 494 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KHNYNO15037 678 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ATXN7O15265 892 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KCNQ3O43525 872 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 VAMP4O75379 141 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 STARD3NLO95772 234 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SNRPBP14678 240 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EPB42P16452 691 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CRKLP46109 303 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 IDH3AP50213 366 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EIF5P55010 431 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PLCB3Q01970 1234 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EXOSC9Q06265 439 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ITPK1Q13572 414 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms