RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PTPRFP10586 1907 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 PHF20L1A8MW92 1017 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 PTPRAP18433 802 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 RGS3P49796 1198 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 ZGPATQ8N5A5 531 aaKnown RBP19.62■□□□□ 0.73
LMNA-223ENST00000515459 GABRQQ9UN88 632 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 NR2E3Q9Y5X4 410 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 DOCK1Q14185 1865 aa19.62■□□□□ 0.73
LMNA-223ENST00000515459 E9PSI1 815 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 ADCY3O60266 1144 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
LMNA-223ENST00000515459 PHKA1P46020 1223 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 GADL1Q6ZQY3 521 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 ZSCAN29Q8IWY8 852 aaPredicted RBP19.61■□□□□ 0.73
LMNA-223ENST00000515459 SLC45A1Q9Y2W3 748 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 AFG3L2Q9Y4W6 797 aa19.61■□□□□ 0.73
LMNA-223ENST00000515459 LRRFIP2Q9Y608 721 aaKnown RBP19.61■□□□□ 0.73
LMNA-223ENST00000515459 GAKO14976 1311 aa19.6■□□□□ 0.73
LMNA-223ENST00000515459 FARP2O94887 1054 aaPredicted RBP19.6■□□□□ 0.73
LMNA-223ENST00000515459 SGPL1O95470 568 aa19.6■□□□□ 0.73
LMNA-223ENST00000515459 FLT3LGP49771 235 aa19.6■□□□□ 0.73
LMNA-223ENST00000515459 UNC93B1Q9H1C4 597 aa19.6■□□□□ 0.73
LMNA-223ENST00000515459 PHIPQ8WWQ0 1821 aa19.6■□□□□ 0.73
LMNA-223ENST00000515459 ZBTB22O15209 634 aa19.59■□□□□ 0.73
LMNA-223ENST00000515459 IL15P40933 162 aaPredicted RBP19.59■□□□□ 0.73
LMNA-223ENST00000515459 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
LMNA-223ENST00000515459 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
LMNA-223ENST00000515459 SLF2Q8IX21 1173 aa19.59■□□□□ 0.73
LMNA-223ENST00000515459 SMCR8Q8TEV9 937 aaPredicted RBP19.59■□□□□ 0.73
LMNA-223ENST00000515459 RFX7Q2KHR2 1363 aa19.58■□□□□ 0.73
LMNA-223ENST00000515459 TNPO2O14787 897 aaKnown RBP19.58■□□□□ 0.72
LMNA-223ENST00000515459 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
LMNA-223ENST00000515459 CAPN2P17655 700 aa19.58■□□□□ 0.72
LMNA-223ENST00000515459 CCDC102BQ68D86 513 aa19.58■□□□□ 0.72
LMNA-223ENST00000515459 SH3BP5LQ7L8J4 393 aa19.58■□□□□ 0.72
LMNA-223ENST00000515459 DZIP1Q86YF9 867 aaKnown RBP19.58■□□□□ 0.72
LMNA-223ENST00000515459 PXYLP1Q8TE99 480 aa19.58■□□□□ 0.72
LMNA-223ENST00000515459 PRO3102Q9H379 93 aa19.58■□□□□ 0.72
LMNA-223ENST00000515459 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
LMNA-223ENST00000515459 ELNP15502 786 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 IRF5Q13568 498 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 ABCF2Q9UG63 623 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 SZT2Q5T011 3432 aa19.57■□□□□ 0.72
LMNA-223ENST00000515459 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
LMNA-223ENST00000515459 INHAP05111 366 aa19.56■□□□□ 0.72
LMNA-223ENST00000515459 ADORA1P30542 326 aa19.56■□□□□ 0.72
LMNA-223ENST00000515459 PICALMQ13492 652 aa19.56■□□□□ 0.72
LMNA-223ENST00000515459 SPTY2D1Q68D10 685 aaPredicted RBP19.56■□□□□ 0.72
LMNA-223ENST00000515459 FAM163AQ96GL9 167 aaPredicted RBP19.56■□□□□ 0.72
LMNA-223ENST00000515459 PA2G4Q9UQ80 394 aaKnown RBP19.56■□□□□ 0.72
LMNA-223ENST00000515459 PDS5AQ29RF7 1337 aaKnown RBP19.55■□□□□ 0.72
LMNA-223ENST00000515459 TRIM75PA6NK02 468 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 EVI5O60447 810 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 TFRCP02786 760 aaKnown RBP19.55■□□□□ 0.72
LMNA-223ENST00000515459 BTDP43251 543 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 SLFN5Q08AF3 891 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 RASGRF1Q13972 1273 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 COA7Q96BR5 231 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 DEFB118Q96PH6 123 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 COPRSQ9NQ92 184 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
LMNA-223ENST00000515459 AGTPBP1Q9UPW5 1226 aa19.55■□□□□ 0.72
LMNA-223ENST00000515459 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
LMNA-223ENST00000515459 SLURP2P0DP57 97 aa19.54■□□□□ 0.72
LMNA-223ENST00000515459 DOCK3Q8IZD9 2030 aa19.54■□□□□ 0.72
LMNA-223ENST00000515459 MROH7-TTC4A0A0A0MT08 1334 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 A0A1W2PPC1 479 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 TIMM10P62072 90 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 ANKRD13CQ8N6S4 541 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 PAK6Q9NQU5 681 aaPredicted RBP19.53■□□□□ 0.72
LMNA-223ENST00000515459 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.53■□□□□ 0.72
LMNA-223ENST00000515459 PNMA3Q9UL41 463 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 TAOK2Q9UL54 1235 aa19.53■□□□□ 0.72
LMNA-223ENST00000515459 TBC1D12O60347 775 aa19.52■□□□□ 0.72
LMNA-223ENST00000515459 FAM110CQ1W6H9 321 aa19.52■□□□□ 0.72
LMNA-223ENST00000515459 TREML2Q5T2D2 321 aa19.52■□□□□ 0.72
LMNA-223ENST00000515459 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
LMNA-223ENST00000515459 CCDC84Q86UT8 332 aaPredicted RBP19.52■□□□□ 0.72
LMNA-223ENST00000515459 RANBP2P49792 3224 aaKnown RBP19.51■□□□□ 0.71
LMNA-223ENST00000515459 ATAD5Q96QE3 1844 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
LMNA-223ENST00000515459 MECOMQ03112 1051 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
LMNA-223ENST00000515459 CRISPLD2Q9H0B8 497 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 OSBPL5Q9H0X9 879 aaPredicted RBP19.51■□□□□ 0.71
LMNA-223ENST00000515459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.51■□□□□ 0.71
LMNA-223ENST00000515459 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
LMNA-223ENST00000515459 AKAP2Q9Y2D5 859 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 LOC285556D6RIA3 1793 aa19.51■□□□□ 0.71
LMNA-223ENST00000515459 A0A1B0GUL7 405 aa19.5■□□□□ 0.71
LMNA-223ENST00000515459 RHBDL3P58872 404 aa19.5■□□□□ 0.71
LMNA-223ENST00000515459 MVPQ14764 893 aaKnown RBP19.5■□□□□ 0.71
LMNA-223ENST00000515459 XAGE2Q96GT9 111 aa19.5■□□□□ 0.71
LMNA-223ENST00000515459 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
LMNA-223ENST00000515459 ALPK3Q96L96 1907 aa19.5■□□□□ 0.71
LMNA-223ENST00000515459 GCLCP48506 637 aaPredicted RBP19.49■□□□□ 0.71
LMNA-223ENST00000515459 SPP2Q13103 211 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms