RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ATRNL1Q5VV63 1379 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 MANSC4A6NHS7 340 aaPredicted RBP15.57■□□□□ 0.08
CLCN3-210ENST00000515420 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
CLCN3-210ENST00000515420 RNF186Q9NXI6 227 aa15.57■□□□□ 0.08
CLCN3-210ENST00000515420 ATP5JP18859 108 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 MAP3K10Q02779 954 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 MAP3K12Q12852 859 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 VGLL4Q14135 290 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 WRNIP1Q96S55 665 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 DDX4Q9NQI0 724 aaKnown RBP15.56■□□□□ 0.08
CLCN3-210ENST00000515420 ZNF112Q9UJU3 913 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
CLCN3-210ENST00000515420 IDH1O75874 414 aaKnown RBP15.55■□□□□ 0.08
CLCN3-210ENST00000515420 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
CLCN3-210ENST00000515420 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
CLCN3-210ENST00000515420 MYH7P12883 1935 aa15.55■□□□□ 0.08
CLCN3-210ENST00000515420 SPDYE5A6NIY4 337 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 TBC1D12O60347 775 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 NOL9Q5SY16 702 aaKnown RBP15.54■□□□□ 0.08
CLCN3-210ENST00000515420 ADGRA1Q86SQ6 560 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 ERO1BQ86YB8 467 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 ZFPM1Q8IX07 1006 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 TEX11Q8IYF3 940 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 OPTNQ96CV9 577 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 OSBPL5Q9H0X9 879 aaPredicted RBP15.54■□□□□ 0.08
CLCN3-210ENST00000515420 ANTXR1Q9H6X2 564 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 ELP3Q9H9T3 547 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLCN3-210ENST00000515420 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
CLCN3-210ENST00000515420 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 DDTLA6NHG4 134 aaPredicted RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 TRPA1O75762 1119 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 CYP7A1P22680 504 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 GJA5P36382 358 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 PICALMQ13492 652 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 MIGA2Q7L4E1 593 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 SH3BP5LQ7L8J4 393 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 MAGEB6Q8N7X4 407 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 HAUS7Q99871 368 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 DHX36Q9H2U1 1008 aaKnown RBP15.53■□□□□ 0.08
CLCN3-210ENST00000515420 NDUFB9Q9Y6M9 179 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 CASP8AP2Q9UKL3 1982 aa15.53■□□□□ 0.08
CLCN3-210ENST00000515420 DOCK1Q14185 1865 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 GTF2A2P52657 109 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 PPATQ06203 517 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.08
CLCN3-210ENST00000515420 IFNL1Q8IU54 200 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
CLCN3-210ENST00000515420 PAG1Q9NWQ8 432 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 TSKSQ9UJT2 592 aa15.52■□□□□ 0.08
CLCN3-210ENST00000515420 PHF20L1A8MW92 1017 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 GOLIM4O00461 696 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
CLCN3-210ENST00000515420 INPP5BP32019 993 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 PPIL2Q13356 520 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 OTUD7BQ6GQQ9 843 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 ZKSCAN4Q969J2 545 aaPredicted RBP15.51■□□□□ 0.07
CLCN3-210ENST00000515420 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 ECHDC1Q9NTX5 307 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 HERC5Q9UII4 1024 aaKnown RBP15.51■□□□□ 0.07
CLCN3-210ENST00000515420 MYH1P12882 1939 aa15.51■□□□□ 0.07
CLCN3-210ENST00000515420 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 FLT1P17948 1338 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 CTNND1O60716 968 aaKnown RBP15.5■□□□□ 0.07
CLCN3-210ENST00000515420 PDE6AP16499 860 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 SLC9C2Q5TAH2 1124 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCN3-210ENST00000515420 BOLA2Q9H3K6 86 aa15.5■□□□□ 0.07
CLCN3-210ENST00000515420 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 DDX60LQ5H9U9 1706 aaKnown RBP15.49■□□□□ 0.07
CLCN3-210ENST00000515420 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
CLCN3-210ENST00000515420 SNAPC2Q13487 334 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 SCYL3Q8IZE3 742 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 TGFBRAP1Q8WUH2 860 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 ZCCHC17Q9NP64 241 aaKnown RBP15.49■□□□□ 0.07
CLCN3-210ENST00000515420 PI4KBQ9UBF8 816 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 ATAD5Q96QE3 1844 aa15.49■□□□□ 0.07
CLCN3-210ENST00000515420 TCRBV5S4A2TA0A5A2 114 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 IGF2BP3O00425 579 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 IRF6O14896 467 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 CETPP11597 493 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 DYNLL1P63167 89 aaKnown RBP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 METTL16Q86W50 562 aaKnown RBP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 MIGA1Q8NAN2 632 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 RIOK1Q9BRS2 568 aaKnown RBP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
CLCN3-210ENST00000515420 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
CLCN3-210ENST00000515420 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms