RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ATP8A2Q9NTI2 1148 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 SAP30BPQ9UHR5 308 aaKnown RBP10.8□□□□□ -0.68
CPNE4-213ENST00000515418 DAGLAQ9Y4D2 1042 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.8□□□□□ -0.68
CPNE4-213ENST00000515418 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 KIF13BQ9NQT8 1826 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 YDJCA8MPS7 323 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 SCRN1Q12765 414 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 CCDC93Q567U6 631 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 KIAA0825Q8IV33 1275 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 RTKN2Q8IZC4 609 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 STAG1Q8WVM7 1258 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 NOL10Q9BSC4 688 aaKnown RBP10.79□□□□□ -0.68
CPNE4-213ENST00000515418 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
CPNE4-213ENST00000515418 PCDHAC2Q9Y5I4 1007 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 MAST2Q6P0Q8 1798 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 JAK2O60674 1132 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 RHBDL3P58872 404 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 NUCB2P80303 420 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 DALRD3Q5D0E6 543 aaKnown RBP10.79□□□□□ -0.68
CPNE4-213ENST00000515418 DACT2Q5SW24 774 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
CPNE4-213ENST00000515418 TEX11Q8IYF3 940 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 IGDCC4Q8TDY8 1250 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 GTF3C6Q969F1 213 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
CPNE4-213ENST00000515418 ANAPC4Q9UJX5 808 aa10.79□□□□□ -0.68
CPNE4-213ENST00000515418 KLF18A0A0U1RQI7 1052 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L3A6NCW0 530 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L4A6NCW7 530 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 PFKFB2O60825 505 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 STRIP1Q5VSL9 837 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L1Q7RTZ2 530 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 SUPT20HQ8NEM7 779 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 DYNLL2Q96FJ2 89 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 KRT23Q9C075 422 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 GAKO14976 1311 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
CPNE4-213ENST00000515418 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.68
CPNE4-213ENST00000515418 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.68
CPNE4-213ENST00000515418 RXRAP19793 462 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 SYT1P21579 422 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 PLCD1P51178 756 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.68
CPNE4-213ENST00000515418 TMEM67Q5HYA8 995 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.68
CPNE4-213ENST00000515418 SLF2Q8IX21 1173 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 FBXL16Q8N461 479 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 DDX11Q96FC9 970 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.68
CPNE4-213ENST00000515418 HPS5Q9UPZ3 1129 aa10.77□□□□□ -0.68
CPNE4-213ENST00000515418 KIAA1551Q9HCM1 1747 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 SH2B2O14492 632 aaPredicted RBP10.77□□□□□ -0.69
CPNE4-213ENST00000515418 RAD17O75943 681 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 MCM4P33991 863 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 EVCP57679 992 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 SBK1Q52WX2 424 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 PSMD1Q99460 953 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 RNF41Q9H4P4 317 aaPredicted RBP10.77□□□□□ -0.69
CPNE4-213ENST00000515418 LY9Q9HBG7 655 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 ANGEL1Q9UNK9 670 aaKnown RBP10.77□□□□□ -0.69
CPNE4-213ENST00000515418 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 SUGT1Q9Y2Z0 365 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 ADAMTSL1Q8N6G6 1762 aa10.77□□□□□ -0.69
CPNE4-213ENST00000515418 COL4A5P29400 1685 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 IGSF3O75054 1194 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 BRD1O95696 1058 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 RBM5P52756 815 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPNE4-213ENST00000515418 PICALMQ13492 652 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
CPNE4-213ENST00000515418 NFXL1Q6ZNB6 911 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 CCDC144CPQ8IYA2 1237 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 USP40Q9NVE5 1235 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 ARPP21Q9UBL0 812 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-213ENST00000515418 WDR19Q8NEZ3 1342 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 STX6O43752 255 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 NMT2O60551 498 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-213ENST00000515418 FGRP09769 529 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 CRKP46108 304 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 CDC42EP5Q6NZY7 148 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 SLC44A5Q8NCS7 719 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 ESR2Q92731 530 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 CD2APQ9Y5K6 639 aa10.76□□□□□ -0.69
CPNE4-213ENST00000515418 TCHHQ07283 1943 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 PSMD14O00487 310 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 BAG4O95429 457 aaKnown RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 PLCG2P16885 1265 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms