RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF341Q9BYN7 854 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 MANSC4A6NHS7 340 aaPredicted RBP14.04□□□□□ -0.16
VCAN-212ENST00000515397 RAB11FIP3O75154 756 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 CYP7A1P22680 504 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 IFNL1Q8IU54 200 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 SAGE1Q9NXZ1 904 aa14.04□□□□□ -0.16
VCAN-212ENST00000515397 ENTPD3O75355 529 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 ZBTB48P10074 688 aaPredicted RBP14.03□□□□□ -0.16
VCAN-212ENST00000515397 SLC4A8Q2Y0W8 1093 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 MAPKAPK5Q8IW41 473 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
VCAN-212ENST00000515397 MAGEB6Q8N7X4 407 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 DNAJC2Q99543 621 aaKnown RBP14.03□□□□□ -0.16
VCAN-212ENST00000515397 BOLA2Q9H3K6 86 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.03□□□□□ -0.16
VCAN-212ENST00000515397 AK9Q5TCS8 1911 aa14.03□□□□□ -0.16
VCAN-212ENST00000515397 UNCXA6NJT0 531 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 GOLIM4O00461 696 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 IRF6O14896 467 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 DGKZQ13574 1117 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 SLFNL1Q499Z3 407 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 CCDC84Q86UT8 332 aaPredicted RBP14.02□□□□□ -0.17
VCAN-212ENST00000515397 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
VCAN-212ENST00000515397 BRI3BPQ8WY22 251 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 HOOK2Q96ED9 719 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 MCOLN1Q9GZU1 580 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 ZNF112Q9UJU3 913 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.17
VCAN-212ENST00000515397 RFX7Q2KHR2 1363 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 CCL15-CCL14A0A0B4J2E2 113 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 GPR25O00155 361 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 CHGBP05060 677 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 INHBEP58166 350 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 CCL15Q16663 113 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 ABHD8Q96I13 439 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
VCAN-212ENST00000515397 LRRCC1Q9C099 1032 aa14.01□□□□□ -0.17
VCAN-212ENST00000515397 SAP30BPQ9UHR5 308 aaKnown RBP14.01□□□□□ -0.17
VCAN-212ENST00000515397 ATRNL1Q5VV63 1379 aa14□□□□□ -0.17
VCAN-212ENST00000515397 RPAP1Q9BWH6 1393 aaPredicted RBP14□□□□□ -0.17
VCAN-212ENST00000515397 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
VCAN-212ENST00000515397 BAG3O95817 575 aa14□□□□□ -0.17
VCAN-212ENST00000515397 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
VCAN-212ENST00000515397 OSBPL5Q9H0X9 879 aaPredicted RBP14□□□□□ -0.17
VCAN-212ENST00000515397 DCTPP1Q9H773 170 aa14□□□□□ -0.17
VCAN-212ENST00000515397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14□□□□□ -0.17
VCAN-212ENST00000515397 MYO5AQ9Y4I1 1855 aaKnown RBP13.99□□□□□ -0.17
VCAN-212ENST00000515397 GTF2A2P52657 109 aa13.99□□□□□ -0.17
VCAN-212ENST00000515397 PPP4CP60510 307 aa13.99□□□□□ -0.17
VCAN-212ENST00000515397 CRHR2Q13324 411 aa13.99□□□□□ -0.17
VCAN-212ENST00000515397 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
VCAN-212ENST00000515397 PALD1Q9ULE6 856 aa13.99□□□□□ -0.17
VCAN-212ENST00000515397 OTOFQ9HC10 1997 aa13.99□□□□□ -0.17
VCAN-212ENST00000515397 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
VCAN-212ENST00000515397 CCDC85CA6NKD9 419 aa13.98□□□□□ -0.17
VCAN-212ENST00000515397 MAP3K12Q12852 859 aa13.98□□□□□ -0.17
VCAN-212ENST00000515397 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
VCAN-212ENST00000515397 ZHX2Q9Y6X8 837 aa13.98□□□□□ -0.17
VCAN-212ENST00000515397 BTBD19C9JJ37 291 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 FKTNO75072 461 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 ALDH1A1P00352 501 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 PDE6AP16499 860 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 ATP5JP18859 108 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 PPATQ06203 517 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 PPIL2Q13356 520 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 SNAPC2Q13487 334 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 SHROOM1Q2M3G4 852 aaPredicted RBP13.97□□□□□ -0.17
VCAN-212ENST00000515397 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
VCAN-212ENST00000515397 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
VCAN-212ENST00000515397 FLT1P17948 1338 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
VCAN-212ENST00000515397 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.17
VCAN-212ENST00000515397 CETPP11597 493 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 PLCG2P16885 1265 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 PTPRAP18433 802 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 USP5P45974 858 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 JAG1P78504 1218 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 CAP1Q01518 475 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 EVX2Q03828 476 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 TAF1CQ15572 869 aaPredicted RBP13.96□□□□□ -0.17
VCAN-212ENST00000515397 NOL9Q5SY16 702 aaKnown RBP13.96□□□□□ -0.17
VCAN-212ENST00000515397 SCYL3Q8IZE3 742 aa13.96□□□□□ -0.17
VCAN-212ENST00000515397 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
VCAN-212ENST00000515397 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
VCAN-212ENST00000515397 TTF1Q15361 905 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms