RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 GPR101Q96P66 508 aaPredicted RBP16.24■□□□□ 0.19
TRIO-222ENST00000515144 SPC25Q9HBM1 224 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 HOOK2Q96ED9 719 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 SPTLC2O15270 562 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 PZPP20742 1482 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 TFAP4Q01664 338 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 MAK16Q9BXY0 300 aaKnown RBP16.24■□□□□ 0.19
TRIO-222ENST00000515144 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 CTNND2Q9UQB3 1225 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 UTP14CQ5TAP6 766 aaKnown RBP16.23■□□□□ 0.19
TRIO-222ENST00000515144 GLG1Q92896 1179 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 TSNARE1Q96NA8 513 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 CCDC172P0C7W6 258 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 IKBKGQ9Y6K9 419 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 IFRD2Q12894 506 aaPredicted RBP16.23■□□□□ 0.19
TRIO-222ENST00000515144 ERFEQ4G0M1 354 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 CCDC117Q8IWD4 279 aaPredicted RBP16.23■□□□□ 0.19
TRIO-222ENST00000515144 IL27Q8NEV9 243 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 FLAD1Q8NFF5 587 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
TRIO-222ENST00000515144 POLR3AO14802 1390 aaPredicted RBP16.23■□□□□ 0.19
TRIO-222ENST00000515144 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
TRIO-222ENST00000515144 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 SMTNP53814 917 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
TRIO-222ENST00000515144 MIGA2Q7L4E1 593 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 GREM2Q9H772 168 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
TRIO-222ENST00000515144 CCDC65Q8IXS2 484 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 TRPC6Q9Y210 931 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 SLC27A2O14975 620 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 CHMLP26374 656 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
TRIO-222ENST00000515144 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 TPH2Q8IWU9 490 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
TRIO-222ENST00000515144 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 TRPC3Q13507 836 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 SV2BQ7L1I2 683 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 PPP1R14CQ8TAE6 165 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 APPBP2Q92624 585 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 GCNT3O95395 438 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 CALCRLQ16602 461 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 MLXIPQ9HAP2 919 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.19
TRIO-222ENST00000515144 TMCO3Q6UWJ1 677 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 NLRP1Q9C000 1473 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 FLOT1O75955 427 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 CHRNDQ07001 517 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
TRIO-222ENST00000515144 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
TRIO-222ENST00000515144 ZBTB38Q8NAP3 1195 aaPredicted RBP16.21■□□□□ 0.19
TRIO-222ENST00000515144 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 DYMQ7RTS9 669 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 MAATS1Q7Z4T9 603 aa16.21■□□□□ 0.19
TRIO-222ENST00000515144 RDH13Q8NBN7 331 aa16.21■□□□□ 0.18
TRIO-222ENST00000515144 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.18
TRIO-222ENST00000515144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
TRIO-222ENST00000515144 GCOM1H8Y6P7 765 aaPredicted RBP16.2■□□□□ 0.18
TRIO-222ENST00000515144 LPXNO60711 386 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 SERPINB2P05120 415 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 MYZAPP0CAP1 466 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 LRRC24Q50LG9 513 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 TTLL3Q9Y4R7 772 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 POLR2DO15514 142 aaKnown RBP16.2■□□□□ 0.18
TRIO-222ENST00000515144 DPP9Q86TI2 863 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.2■□□□□ 0.18
TRIO-222ENST00000515144 TBC1D32Q96NH3 1257 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 METP08581 1390 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 GOLGA8HP0CJ92 632 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 AGTPBP1Q9UPW5 1226 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 A0A1W2PRG0 241 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 TRAF5O00463 557 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 BMP15O95972 392 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 AS3MTQ9HBK9 375 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 POLR3GO15318 223 aaPredicted RBP16.2■□□□□ 0.18
TRIO-222ENST00000515144 RASA3Q14644 834 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 ZSCAN23Q3MJ62 389 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 WDR44Q5JSH3 913 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 LRRC45Q96CN5 670 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
TRIO-222ENST00000515144 USP17L12C9JPN9 530 aa16.19■□□□□ 0.18
TRIO-222ENST00000515144 USP17L21D6R901 530 aa16.19■□□□□ 0.18
TRIO-222ENST00000515144 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms