RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
SGCA-211ENST00000514934 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
SGCA-211ENST00000514934 DOCK3Q8IZD9 2030 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 DDTLA6NHG4 134 aaPredicted RBP18.05■□□□□ 0.48
SGCA-211ENST00000514934 CCDC85CA6NKD9 419 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
SGCA-211ENST00000514934 BTDP43251 543 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 MOGSQ13724 837 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 NOL9Q5SY16 702 aaKnown RBP18.05■□□□□ 0.48
SGCA-211ENST00000514934 SPTY2D1Q68D10 685 aaPredicted RBP18.05■□□□□ 0.48
SGCA-211ENST00000514934 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 ERO1BQ86YB8 467 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 DZIP1Q86YF9 867 aaKnown RBP18.05■□□□□ 0.48
SGCA-211ENST00000514934 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 ZNF341Q9BYN7 854 aa18.05■□□□□ 0.48
SGCA-211ENST00000514934 IRF6O14896 467 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
SGCA-211ENST00000514934 UQCRFS1P1P0C7P4 283 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 PPIL2Q13356 520 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 CSADQ9Y600 493 aa18.04■□□□□ 0.48
SGCA-211ENST00000514934 FKTNO75072 461 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 MLLT1Q03111 559 aaPredicted RBP18.03■□□□□ 0.48
SGCA-211ENST00000514934 C20orf194Q5TEA3 1177 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 SNRKQ9NRH2 765 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 KCNH4Q9UQ05 1017 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
SGCA-211ENST00000514934 CCL15-CCL14A0A0B4J2E2 113 aa18.02■□□□□ 0.48
SGCA-211ENST00000514934 GTF2A2P52657 109 aa18.02■□□□□ 0.48
SGCA-211ENST00000514934 CCL15Q16663 113 aa18.02■□□□□ 0.48
SGCA-211ENST00000514934 NAV1Q8NEY1 1877 aa18.02■□□□□ 0.48
SGCA-211ENST00000514934 PIH1D3Q9NQM4 214 aaKnown RBP18.02■□□□□ 0.48
SGCA-211ENST00000514934 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
SGCA-211ENST00000514934 PPATQ06203 517 aa18.01■□□□□ 0.47
SGCA-211ENST00000514934 GORABQ5T7V8 394 aa18.01■□□□□ 0.47
SGCA-211ENST00000514934 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
SGCA-211ENST00000514934 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
SGCA-211ENST00000514934 BTBD19C9JJ37 291 aa18■□□□□ 0.47
SGCA-211ENST00000514934 ZAP70P43403 619 aa18■□□□□ 0.47
SGCA-211ENST00000514934 SLF2Q8IX21 1173 aa18■□□□□ 0.47
SGCA-211ENST00000514934 MAP4K4O95819 1239 aaPredicted RBP17.99■□□□□ 0.47
SGCA-211ENST00000514934 PPP4CP60510 307 aa17.99■□□□□ 0.47
SGCA-211ENST00000514934 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
SGCA-211ENST00000514934 RRP1BQ14684 758 aaKnown RBP17.99■□□□□ 0.47
SGCA-211ENST00000514934 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
SGCA-211ENST00000514934 TTC39AQ5SRH9 613 aa17.99■□□□□ 0.47
SGCA-211ENST00000514934 OTOP1Q7RTM1 612 aa17.99■□□□□ 0.47
SGCA-211ENST00000514934 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
SGCA-211ENST00000514934 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
SGCA-211ENST00000514934 TBC1D12O60347 775 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 MS4A1P11836 297 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 GSTO1P78417 241 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 SNAPC2Q13487 334 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 FBXO46Q6PJ61 603 aaPredicted RBP17.98■□□□□ 0.47
SGCA-211ENST00000514934 RHPN1Q8TCX5 695 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 SH3RF3Q8TEJ3 882 aaPredicted RBP17.98■□□□□ 0.47
SGCA-211ENST00000514934 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
SGCA-211ENST00000514934 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 NDUFB9Q9Y6M9 179 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 MYH8P13535 1937 aa17.98■□□□□ 0.47
SGCA-211ENST00000514934 BAZ2AQ9UIF9 1905 aaKnown RBP17.98■□□□□ 0.47
SGCA-211ENST00000514934 CETPP11597 493 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 PICALMQ13492 652 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 CCDC158Q5M9N0 1113 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
SGCA-211ENST00000514934 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
SGCA-211ENST00000514934 CD99L2Q8TCZ2 262 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
SGCA-211ENST00000514934 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
SGCA-211ENST00000514934 IGSF3O75054 1194 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 LDHCP07864 332 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 PTPRAP18433 802 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 TAF1CQ15572 869 aaPredicted RBP17.96■□□□□ 0.47
SGCA-211ENST00000514934 OTUD7BQ6GQQ9 843 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 METTL16Q86W50 562 aaKnown RBP17.96■□□□□ 0.47
SGCA-211ENST00000514934 SCYL3Q8IZE3 742 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 LRP2BPQ9P2M1 347 aa17.96■□□□□ 0.47
SGCA-211ENST00000514934 FAM196BA6NMK8 535 aa17.95■□□□□ 0.46
SGCA-211ENST00000514934 NAA16Q6N069 864 aaPredicted RBP17.95■□□□□ 0.46
SGCA-211ENST00000514934 AACSQ86V21 672 aa17.95■□□□□ 0.46
SGCA-211ENST00000514934 ERC1Q8IUD2 1116 aa17.95■□□□□ 0.46
SGCA-211ENST00000514934 DNAJC18Q9H819 358 aa17.95■□□□□ 0.46
SGCA-211ENST00000514934 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
SGCA-211ENST00000514934 AFG3L2Q9Y4W6 797 aa17.95■□□□□ 0.46
SGCA-211ENST00000514934 A0A0G2JLL6 359 aaPredicted RBP17.94■□□□□ 0.46
SGCA-211ENST00000514934 TLR2O60603 784 aa17.94■□□□□ 0.46
SGCA-211ENST00000514934 CTNND1O60716 968 aaKnown RBP17.94■□□□□ 0.46
SGCA-211ENST00000514934 CTGFP29279 349 aa17.94■□□□□ 0.46
SGCA-211ENST00000514934 SP3Q02447 781 aa17.94■□□□□ 0.46
SGCA-211ENST00000514934 PRRT2Q7Z6L0 340 aaPredicted RBP17.94■□□□□ 0.46
SGCA-211ENST00000514934 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
SGCA-211ENST00000514934 TEX11Q8IYF3 940 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms