RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 HOMEZQ8IX15 550 aa7.51□□□□□ -1.21
MATR3-223ENST00000514402 ACSBG1Q96GR2 724 aa7.51□□□□□ -1.21
MATR3-223ENST00000514402 DISC1Q9NRI5 854 aa7.51□□□□□ -1.21
MATR3-223ENST00000514402 PIM2Q9P1W9 311 aa7.51□□□□□ -1.21
MATR3-223ENST00000514402 CELA3AP09093 270 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 RLBP1P12271 317 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
MATR3-223ENST00000514402 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 GATA6Q92908 595 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 PCMTD2Q9NV79 361 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
MATR3-223ENST00000514402 CCDC85BQ15834 202 aaPredicted RBP7.49□□□□□ -1.21
MATR3-223ENST00000514402 NBPF11Q86T75 865 aa7.49□□□□□ -1.21
MATR3-223ENST00000514402 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
MATR3-223ENST00000514402 NOC4LQ9BVI4 516 aaKnown RBP7.49□□□□□ -1.21
MATR3-223ENST00000514402 C1GALT1Q9NS00 363 aa7.49□□□□□ -1.21
MATR3-223ENST00000514402 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
MATR3-223ENST00000514402 SORBS3O60504 671 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 FOSL1P15407 271 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 TTLL4Q14679 1199 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 DUSP27Q5VZP5 1158 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 TTBK2Q6IQ55 1244 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 DTX1Q86Y01 620 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 GRIN3AQ8TCU5 1115 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 CRELD1Q96HD1 420 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
MATR3-223ENST00000514402 FANCGO15287 622 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 SPINK2P20155 84 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 SSTR4P31391 388 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 ADMP35318 185 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 RING1Q06587 406 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 TAF1CQ15572 869 aaPredicted RBP7.47□□□□□ -1.21
MATR3-223ENST00000514402 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 RNF19AQ9NV58 838 aa7.47□□□□□ -1.21
MATR3-223ENST00000514402 USP31Q70CQ4 1352 aa7.46□□□□□ -1.21
MATR3-223ENST00000514402 CYP27C1Q4G0S4 372 aa7.46□□□□□ -1.22
MATR3-223ENST00000514402 KCT2Q8NC54 265 aa7.46□□□□□ -1.22
MATR3-223ENST00000514402 PSMG3-AS1Q96PY0 264 aa7.46□□□□□ -1.22
MATR3-223ENST00000514402 MRS2Q9HD23 443 aa7.46□□□□□ -1.22
MATR3-223ENST00000514402 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
MATR3-223ENST00000514402 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
MATR3-223ENST00000514402 NEFMP07197 916 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
MATR3-223ENST00000514402 LMNB1P20700 586 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
MATR3-223ENST00000514402 TMCO4Q5TGY1 634 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 RASIP1Q5U651 963 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 AGMOQ6ZNB7 445 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 GAL3ST3Q96A11 431 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 SNCAIPQ9Y6H5 919 aa7.45□□□□□ -1.22
MATR3-223ENST00000514402 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 CYP26A1O43174 497 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 DYNC1LI2O43237 492 aaPredicted RBP7.44□□□□□ -1.22
MATR3-223ENST00000514402 MED26O95402 600 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 CTSHP09668 335 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 LIG3P49916 1009 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 MSMPQ1L6U9 139 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 DIEXFQ68CQ4 756 aaKnown RBP7.44□□□□□ -1.22
MATR3-223ENST00000514402 MPRIPQ6WCQ1 1025 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 ISL2Q96A47 359 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 ELMO3Q96BJ8 720 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 TACC3Q9Y6A5 838 aa7.44□□□□□ -1.22
MATR3-223ENST00000514402 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 HDXQ7Z353 690 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
MATR3-223ENST00000514402 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 SSU72Q9NP77 194 aaKnown RBP7.43□□□□□ -1.22
MATR3-223ENST00000514402 PICK1Q9NRD5 415 aa7.43□□□□□ -1.22
MATR3-223ENST00000514402 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 PRNPP04156 253 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 HOXA10P31260 410 aaPredicted RBP7.42□□□□□ -1.22
MATR3-223ENST00000514402 NTF4P34130 210 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 PPM1JQ5JR12 505 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 CYFIP1Q7L576 1253 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
MATR3-223ENST00000514402 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
MATR3-223ENST00000514402 CDC37L1Q7L3B6 337 aa7.41□□□□□ -1.22
MATR3-223ENST00000514402 C12orf40Q86WS4 652 aa7.41□□□□□ -1.22
MATR3-223ENST00000514402 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
MATR3-223ENST00000514402 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
MATR3-223ENST00000514402 MIR1-1HGQ9H1L0 117 aa7.41□□□□□ -1.22
MATR3-223ENST00000514402 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
MATR3-223ENST00000514402 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
MATR3-223ENST00000514402 WNT11O96014 354 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 CAP2P40123 477 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 CDK5R2Q13319 367 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 PWP1Q13610 501 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 VSIG10LQ86VR7 867 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 LGR6Q9HBX8 967 aa7.4□□□□□ -1.22
MATR3-223ENST00000514402 TAGLNQ01995 201 aaKnown RBP7.39□□□□□ -1.23
MATR3-223ENST00000514402 PTPN11Q06124 597 aaPredicted RBP7.39□□□□□ -1.23
MATR3-223ENST00000514402 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms