RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-211	ENST00000514344	MOGS	Q13724	837 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	GADL1	Q6ZQY3	521 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	DZIP1L	Q8IYY4	767 aa	Known RBP	4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	TRIB2	Q92519	343 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	BSDC1	Q9NW68	430 aa	Predicted RBP	4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	KCNH4	Q9UQ05	1017 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	NUDC	Q9Y266	331 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	DLG5	Q8TDM6	1919 aa		4.24	□□□□□ -1.73
CHD1-211	ENST00000514344	TAF5L	O75529	589 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	BMP1	P13497	986 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	CYP2B6	P20813	491 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	NHLH1	Q02575	133 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	SKIV2L	Q15477	1246 aa	Known RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	ASTL	Q6HA08	431 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	GPAT2	Q6NUI2	795 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	LEMD3	Q9Y2U8	911 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	AK9	Q5TCS8	1911 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	SMIM22	K7EJ46	135 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	MFSD14B	Q5SR56	506 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	CFAP53	Q96M91	514 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	MYD88	Q99836	296 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	ARAP2	Q8WZ64	1704 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	PTPRZ1	P23471	2315 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	LTBP2	Q14767	1821 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	NEFM	P07197	916 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	HSPA5	P11021	654 aa	Known RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	HSP90B1	P14625	803 aa	Known RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	CCND3	P30281	292 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	CTSW	P56202	376 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	ADGRE1	Q14246	886 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	TIFA	Q96CG3	184 aa		4.23	□□□□□ -1.73
CHD1-211	ENST00000514344	GPR37L1	O60883	481 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	IGHMBP2	P38935	993 aa	Known RBP	4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	PBX2	P40425	430 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	RTP1	P59025	263 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	HDGFL1	Q5TGJ6	251 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	CCDC129	Q6ZRS4	1044 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	SH3RF1	Q7Z6J0	888 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	TTLL11	Q8NHH1	800 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	MPHOSPH8	Q99549	860 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	ZHX2	Q9Y6X8	837 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	MAST2	Q6P0Q8	1798 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	EPG5	Q9HCE0	2579 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	DMXL1	Q9Y485	3027 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	TRIM75P	A6NK02	468 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	GRXCR1	A8MXD5	290 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	CRK	P46108	304 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	EPHB4	P54760	987 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	CHRND	Q07001	517 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	CACNB2	Q08289	660 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	TCP10	Q12799	353 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	DCAF15	Q66K64	600 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	PHOX2B	Q99453	314 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	SERPINA10	Q9UK55	444 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	PRRC2B	Q5JSZ5	2229 aa	Known RBP	4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	ASPM	Q8IZT6	3477 aa		4.22	□□□□□ -1.73
CHD1-211	ENST00000514344	PEX10	O60683	326 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	PCCA	P05165	728 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	CNGA1	P29973	690 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	TRIM28	Q13263	835 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	ZNF804A	Q7Z570	1209 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	CCDC84	Q86UT8	332 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	FBXL18	Q96ME1	805 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	ZNF341	Q9BYN7	854 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	GJD2	Q9UKL4	321 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	LAS1L	Q9Y4W2	734 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	PER1	O15534	1290 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	PLIN1	O60240	522 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	ST18	O60284	1047 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	ITGB8	P26012	769 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	GRIK5	Q16478	980 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	CCL14	Q16627	93 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	FAM110C	Q1W6H9	321 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	AKNAD1	Q5T1N1	836 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	MAP3K21	Q5TCX8	1036 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	FASTKD5	Q7L8L6	764 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	PHAX	Q9H814	394 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	CWC25	Q9NXE8	425 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	TMOD2	Q9NZR1	351 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	FRYL	O94915	3013 aa		4.21	□□□□□ -1.74
CHD1-211	ENST00000514344	TRIM43B	A6NCK2	446 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	IL1R1	P14778	569 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	ITGA6	P23229	1130 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	GOLGA2	Q08379	1002 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	TRIM60	Q495X7	471 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	TREML2	Q5T2D2	321 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	ANO1	Q5XXA6	986 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	PBX4	Q9BYU1	374 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	ANKRD2	Q9GZV1	360 aa		4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	DBF4	Q9UBU7	674 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD1-211	ENST00000514344	PLXNA1	Q9UIW2	1896 aa		4.2	□□□□□ -1.74

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