RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 DHX58Q96C10 678 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 ZNF213O14771 459 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 RXRAP19793 462 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 NLRP12P59046 1061 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 TRDNQ13061 729 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 WDR24Q96S15 920 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 DEF6Q9H4E7 631 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 ITGA6P23229 1130 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 CNNM3Q8NE01 707 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 GDAP1L1Q96MZ0 367 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 A0A0G2JS52 829 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 WDHD1O75717 1129 aaPredicted RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 FGAP02671 866 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 APPP05067 770 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 MYL5Q02045 173 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 ATL3Q6DD88 541 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 NCOA7Q8NI08 942 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 PLA2G12BQ9BX93 195 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
VCAN-210ENST00000513960 FANCLQ9NW38 375 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 BTG4Q9NY30 223 aa11.03□□□□□ -0.64
VCAN-210ENST00000513960 PRC1O43663 620 aa11.02□□□□□ -0.64
VCAN-210ENST00000513960 CTDNEP1O95476 244 aa11.02□□□□□ -0.64
VCAN-210ENST00000513960 CSF1RP07333 972 aa11.02□□□□□ -0.64
VCAN-210ENST00000513960 GPR161Q8N6U8 529 aaKnown RBP11.02□□□□□ -0.64
VCAN-210ENST00000513960 TNS2Q63HR2 1409 aa11.02□□□□□ -0.64
VCAN-210ENST00000513960 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 KLF18A0A0U1RQI7 1052 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 TBC1D8O95759 1140 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 PFKFB1P16118 471 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 CHMP4BP1P59074 171 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 SCARF1Q14162 830 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 FAN1Q9Y2M0 1017 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 GLI3P10071 1580 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 PHLPP2Q6ZVD8 1323 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 KIF5CO60282 957 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 E2F4Q16254 413 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 LONRF3Q496Y0 759 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 ZNF569Q5MCW4 686 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 PPFIBP1Q86W92 1011 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.65
VCAN-210ENST00000513960 IRS4O14654 1257 aaPredicted RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 GPAA1O43292 621 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 IDH1O75874 414 aaKnown RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 ADALQ6DHV7 355 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 PI16Q6UXB8 463 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 GREM2Q9H772 168 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 TULP2O00295 520 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 TRIM29Q14134 588 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 DHX8Q14562 1220 aaKnown RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 TTF1Q15361 905 aaPredicted RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 HLFQ16534 295 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 TTLL11Q8NHH1 800 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 ACTN2P35609 894 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 CTSWP56202 376 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 TOGARAM2Q6ZUX3 1019 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 FMR1NBQ8N0W7 255 aaPredicted RBP11.01□□□□□ -0.65
VCAN-210ENST00000513960 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 RAI14Q9P0K7 980 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 ARHGAP6O43182 974 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 STX17P56962 302 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
VCAN-210ENST00000513960 IVLP07476 585 aa11□□□□□ -0.65
VCAN-210ENST00000513960 FBXO18Q8NFZ0 1043 aa11□□□□□ -0.65
VCAN-210ENST00000513960 HINFPQ9BQA5 517 aa11□□□□□ -0.65
VCAN-210ENST00000513960 ACBD3Q9H3P7 528 aa11□□□□□ -0.65
VCAN-210ENST00000513960 HOOK1Q9UJC3 728 aaKnown RBP11□□□□□ -0.65
VCAN-210ENST00000513960 RIPOR2Q9Y4F9 1068 aa11□□□□□ -0.65
VCAN-210ENST00000513960 CARMIL3Q8ND23 1372 aa11□□□□□ -0.65
VCAN-210ENST00000513960 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
VCAN-210ENST00000513960 ABCC12Q96J65 1359 aa11□□□□□ -0.65
VCAN-210ENST00000513960 H3BQF6 201 aa11□□□□□ -0.65
VCAN-210ENST00000513960 TUBB4AP04350 444 aa11□□□□□ -0.65
VCAN-210ENST00000513960 CLIC6Q96NY7 704 aa11□□□□□ -0.65
VCAN-210ENST00000513960 EXOC5O00471 708 aa11□□□□□ -0.65
VCAN-210ENST00000513960 N4BP1O75113 896 aaKnown RBP11□□□□□ -0.65
VCAN-210ENST00000513960 ZRANB2O95218 330 aaKnown RBP eCLIP11□□□□□ -0.65
VCAN-210ENST00000513960 SRLQ86TD4 932 aa11□□□□□ -0.65
VCAN-210ENST00000513960 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms