RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 HGSNATQ68CP4 663 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 FDX2Q6P4F2 183 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 FBXO33Q7Z6M2 555 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 RAD18Q9NS91 495 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 KCNK4Q9NYG8 393 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
CLDND1-228ENST00000513873 CUL7Q14999 1698 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 EPRSP07814 1512 aaKnown RBP6.76□□□□□ -1.33
CLDND1-228ENST00000513873 MAOBP27338 520 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 GRIK1P39086 918 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 DAB2P98082 770 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 TPTE2Q6XPS3 522 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
CLDND1-228ENST00000513873 FOXD4L4Q8WXT5 416 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-228ENST00000513873 EMILIN2Q9BXX0 1053 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 CYP4F12Q9HCS2 524 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 VTI1BQ9UEU0 232 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 PTPRGP23470 1445 aa6.76□□□□□ -1.33
CLDND1-228ENST00000513873 KIAA1324LA8MWY0 1029 aaPredicted RBP6.75□□□□□ -1.33
CLDND1-228ENST00000513873 ADAM11O75078 769 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 ALX3O95076 343 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 NOS3P29474 1203 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 EXOSC6Q5RKV6 272 aaKnown RBP6.75□□□□□ -1.33
CLDND1-228ENST00000513873 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 TMC4Q7Z404 712 aa6.75□□□□□ -1.33
CLDND1-228ENST00000513873 AGGF1Q8N302 714 aaeCLIP6.75□□□□□ -1.33
CLDND1-228ENST00000513873 C12orf50Q8NA57 414 aaPredicted RBP6.75□□□□□ -1.33
CLDND1-228ENST00000513873 LOC100289279A0A1B0GTE1 492 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 MEGF11A6BM72 1044 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 WISP1O95388 367 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 LMNB1P20700 586 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 DIEXFQ68CQ4 756 aaKnown RBP6.74□□□□□ -1.33
CLDND1-228ENST00000513873 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 CBX8Q9HC52 389 aa6.74□□□□□ -1.33
CLDND1-228ENST00000513873 UHRF1BP1LA0JNW5 1464 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 GAS2O43903 313 aaKnown RBP6.73□□□□□ -1.33
CLDND1-228ENST00000513873 LRRC14Q15048 493 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 C3orf58Q8NDZ4 430 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 FAM161BQ96MY7 647 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 BCORL1Q5H9F3 1711 aa6.73□□□□□ -1.33
CLDND1-228ENST00000513873 CARMIL1Q5VZK9 1371 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 NME2P22392 152 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 ARNTP27540 789 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 HSPA2P54652 639 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-228ENST00000513873 INTS5Q6P9B9 1019 aaKnown RBP6.72□□□□□ -1.33
CLDND1-228ENST00000513873 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 KCNB2Q92953 911 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 MEGF10Q96KG7 1140 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-228ENST00000513873 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
CLDND1-228ENST00000513873 PRXQ9BXM0 1461 aa6.72□□□□□ -1.33
CLDND1-228ENST00000513873 CFAP43Q8NDM7 1665 aa6.71□□□□□ -1.33
CLDND1-228ENST00000513873 MAGI3Q5TCQ9 1506 aa6.71□□□□□ -1.33
CLDND1-228ENST00000513873 TM4SF5O14894 197 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 DHX15O43143 795 aaKnown RBP6.71□□□□□ -1.34
CLDND1-228ENST00000513873 FBXO24O75426 580 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 GSTP1P09211 210 aaKnown RBP6.71□□□□□ -1.34
CLDND1-228ENST00000513873 USP11P51784 963 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 TAGLNQ01995 201 aaKnown RBP6.71□□□□□ -1.34
CLDND1-228ENST00000513873 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
CLDND1-228ENST00000513873 UVSSAQ2YD98 709 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 ANKRD24Q8TF21 1146 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 TRIM56Q9BRZ2 755 aaKnown RBP6.71□□□□□ -1.34
CLDND1-228ENST00000513873 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 KDM5BQ9UGL1 1544 aa6.71□□□□□ -1.34
CLDND1-228ENST00000513873 CEP162Q5TB80 1403 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 MADDQ8WXG6 1647 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 WNT11O96014 354 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 RLBP1P12271 317 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 AKAP4Q5JQC9 854 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 SMG8Q8ND04 991 aaKnown RBP6.7□□□□□ -1.34
CLDND1-228ENST00000513873 UTP4Q969X6 686 aaKnown RBP6.7□□□□□ -1.34
CLDND1-228ENST00000513873 ACSBG1Q96GR2 724 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 CRELD1Q96HD1 420 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
CLDND1-228ENST00000513873 RAPGEF2Q9Y4G8 1499 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 ZNF16P17020 682 aaPredicted RBP6.69□□□□□ -1.34
CLDND1-228ENST00000513873 RXRBP28702 533 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 OGFOD2Q6N063 350 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 Q6ZS46 218 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
CLDND1-228ENST00000513873 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 SUGCTQ9HAC7 445 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 CYP8B1Q9UNU6 501 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 ARAP3Q8WWN8 1544 aa6.69□□□□□ -1.34
CLDND1-228ENST00000513873 CARMIL2Q6F5E8 1435 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 UACAQ9BZF9 1416 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 IQSEC2Q5JU85 1478 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 ENC1O14682 589 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 MED26O95402 600 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms