RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 CMA1P23946 247 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PDE4BQ07343 736 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 TBC1D8BQ0IIM8 1120 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 WWC2Q6AWC2 1192 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 CMTR1Q8N1G2 835 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 ERCC3P19447 782 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 HNRNPH2P55795 449 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 RBM6P78332 1123 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 NECTIN1Q15223 517 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 JAKMIP2Q96AA8 810 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA6BA6NDN3 693 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 SMIM23A6NLE4 172 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 ZAP70P43403 619 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 CTDSPL2Q05D32 466 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 RESTQ13127 1097 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 CERS3Q8IU89 383 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 PGBD1Q96JS3 809 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 INPP5BP32019 993 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 GYS2P54840 703 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 CTNNBL1Q8WYA6 563 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 ARMT1Q9H993 441 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 GCOM1H8Y6P7 765 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 MYZAPP0CAP1 466 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 PNMA6AP0CW24 399 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.013e-6■■□□□ 11.7
CLCN3-209ENST00000513761 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 TMEM87BQ96K49 555 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 GBP6Q6ZN66 633 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 DBNLQ9UJU6 430 aaKnown RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 RCOR1Q9UKL0 485 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-209ENST00000513761 DEXIO95424 95 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 ATP1A3P13637 1013 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 PAK1Q13153 545 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 TUBB2AQ13885 445 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 TUBB2BQ9BVA1 445 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 PCDHA5Q9Y5H7 936 aa8.74□□□□□ -1.01
CLCN3-209ENST00000513761 COBLO75128 1261 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 LONRF2Q1L5Z9 754 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ZSCAN29Q8IWY8 852 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-209ENST00000513761 RTEL1Q9NZ71 1219 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 DTHD1Q6ZMT9 781 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 PIK3AP1Q6ZUJ8 805 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 TTC14Q96N46 770 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF287Q9HBT7 754 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ABCA8O94911 1581 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 UBE4AQ14139 1066 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 CPLX4Q7Z7G2 160 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 RGS22Q8NE09 1264 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 FBXO18Q8NFZ0 1043 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 NOC4LQ9BVI4 516 aaKnown RBP8.73□□□□□ -1.01
CLCN3-209ENST00000513761 WWC3Q9ULE0 1092 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 TLDC2A0PJX2 215 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 CCDC91Q7Z6B0 441 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 PLBD2Q8NHP8 589 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA5Q8TBA6 731 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 SELENOSQ9BQE4 189 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 PRDM1O75626 825 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 C8orf74Q6P047 294 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 PLA2G4DQ86XP0 818 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF496Q96IT1 587 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 KCNA6P17658 529 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 SF3A3Q12874 501 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLCN3-209ENST00000513761 RABGGTAQ92696 567 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 HAUS7Q99871 368 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 ST7Q9NRC1 585 aa8.73□□□□□ -1.01
CLCN3-209ENST00000513761 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
CLCN3-209ENST00000513761 KDRP35968 1356 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 ZBTB22O15209 634 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 KIAA0753Q2KHM9 967 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 PARD6BQ9BYG5 372 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 CARMIL3Q8ND23 1372 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 A0A1W2PQ27 194 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 A0A1W2PQ64 194 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 A0A1W2PQD8 194 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 TRIM14Q14142 442 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 TRMT1LQ7Z2T5 733 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 VPS54Q9P1Q0 977 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 AATKQ6ZMQ8 1374 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 RTL9Q8NET4 1388 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 POLR1AO95602 1720 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 BICDL2A1A5D9 508 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 PRAMEF22A3QJZ6 481 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 EZRP15311 586 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 ZSCAN20P17040 1043 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 ZRSR2Q15696 482 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 CSGALNACT2Q8N6G5 542 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 NELFBQ8WX92 580 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 CRNKL1Q9BZJ0 848 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 RRP15Q9Y3B9 282 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 NCOA3Q9Y6Q9 1424 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms