RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 GNAT2P19087 354 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 IFNL3Q8IZI9 196 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 CCDC47Q96A33 483 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 IKBKBO14920 756 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 POSTNQ15063 836 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 KIF20AO95235 890 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 DEXIO95424 95 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CASP7P55210 303 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 PPP6R2O75170 966 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 ANKRD7Q92527 254 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 HSPA2P54652 639 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CCZ1BP86790 482 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 MLKLQ8NB16 471 aa13.11□□□□□ -0.31
CTNND2-215ENST00000513588 OSBPL5Q9H0X9 879 aaPredicted RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
CTNND2-215ENST00000513588 NLRP5P59047 1200 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 MEGF6O75095 1541 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 GABPB1Q06547 395 aaPredicted RBP13.1□□□□□ -0.31
CTNND2-215ENST00000513588 TTLL11Q8NHH1 800 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 EVCP57679 992 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTNND2-215ENST00000513588 LZTFL1Q9NQ48 299 aa13.1□□□□□ -0.31
CTNND2-215ENST00000513588 N4BP3O15049 544 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 CCDC175P0C221 793 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 LONRF3Q496Y0 759 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
CTNND2-215ENST00000513588 ZBTB22O15209 634 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
CTNND2-215ENST00000513588 NFAT5O94916 1531 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
CTNND2-215ENST00000513588 ANTXR2P58335 489 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
CTNND2-215ENST00000513588 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
CTNND2-215ENST00000513588 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
CTNND2-215ENST00000513588 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.31
CTNND2-215ENST00000513588 MAGEB6P1A0A0J9YX57 407 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 ERLIN1O75477 346 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 HLFQ16534 295 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
CTNND2-215ENST00000513588 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTNND2-215ENST00000513588 CDC27P30260 824 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 STIM1Q13586 685 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 LTN1O94822 1766 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 LRRC37A3O60309 1634 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 PRDM1O75626 825 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 BMP15O95972 392 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 KRT2P35908 639 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 DHX37Q8IY37 1157 aaKnown RBP13.08□□□□□ -0.32
CTNND2-215ENST00000513588 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
CTNND2-215ENST00000513588 AKR1B15C9JRZ8 316 aaPredicted RBP13.07□□□□□ -0.32
CTNND2-215ENST00000513588 MARCH6O60337 910 aa13.07□□□□□ -0.32
CTNND2-215ENST00000513588 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
CTNND2-215ENST00000513588 RRAGBQ5VZM2 374 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms