RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 HMGCRP04035 888 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 PTPRAP18433 802 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 C11orf49Q9H6J7 331 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
CLDND1-227ENST00000513452 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 SLC45A1Q9Y2W3 748 aa13.23□□□□□ -0.29
CLDND1-227ENST00000513452 ATRNL1Q5VV63 1379 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 AK9Q5TCS8 1911 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 TRIM75PA6NK02 468 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 AFG3L2Q9Y4W6 797 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 DOCK2Q92608 1830 aa13.22□□□□□ -0.29
CLDND1-227ENST00000513452 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 PDE8BO95263 885 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-227ENST00000513452 TRIM32Q13049 653 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
CLDND1-227ENST00000513452 HMX1Q9NP08 348 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-227ENST00000513452 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-227ENST00000513452 PFASO15067 1338 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 PTPRFP10586 1907 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 VAMP4O75379 141 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 PRDX5P30044 214 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 SLC4A10Q6U841 1118 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-227ENST00000513452 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-227ENST00000513452 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
CLDND1-227ENST00000513452 IL16Q14005 1332 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 OGDHLQ9ULD0 1010 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 LRRFIP2Q9Y608 721 aaKnown RBP13.19□□□□□ -0.3
CLDND1-227ENST00000513452 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
CLDND1-227ENST00000513452 KIF16BQ96L93 1317 aa13.18□□□□□ -0.3
CLDND1-227ENST00000513452 VCANP13611 3396 aa13.18□□□□□ -0.3
CLDND1-227ENST00000513452 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
CLDND1-227ENST00000513452 RGS3P49796 1198 aa13.18□□□□□ -0.3
CLDND1-227ENST00000513452 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
CLDND1-227ENST00000513452 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
CLDND1-227ENST00000513452 KLHDC4Q8TBB5 520 aa13.18□□□□□ -0.3
CLDND1-227ENST00000513452 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-227ENST00000513452 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
CLDND1-227ENST00000513452 FGFR2P21802 821 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 FAM109BQ6ICB4 259 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-227ENST00000513452 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 ANKRD44Q8N8A2 993 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 TRIB2Q92519 343 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
CLDND1-227ENST00000513452 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 CTNND1O60716 968 aaKnown RBP13.16□□□□□ -0.3
CLDND1-227ENST00000513452 ENTPD3O75355 529 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
CLDND1-227ENST00000513452 SLC5A1P13866 664 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
CLDND1-227ENST00000513452 LRRC26Q2I0M4 334 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
CLDND1-227ENST00000513452 PRDM6Q9NQX0 595 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 RFX7Q2KHR2 1363 aa13.16□□□□□ -0.3
CLDND1-227ENST00000513452 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
CLDND1-227ENST00000513452 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-227ENST00000513452 COL6A1P12109 1028 aa13.15□□□□□ -0.3
CLDND1-227ENST00000513452 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
CLDND1-227ENST00000513452 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-227ENST00000513452 IDI2Q9BXS1 227 aa13.15□□□□□ -0.3
CLDND1-227ENST00000513452 UTYO14607 1347 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 CYP2B6P20813 491 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 PICALMQ13492 652 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 MAP3K21Q5TCX8 1036 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 MAFAQ8NHW3 353 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-227ENST00000513452 LPIN2Q92539 896 aa13.14□□□□□ -0.31
CLDND1-227ENST00000513452 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
CLDND1-227ENST00000513452 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
CLDND1-227ENST00000513452 HMGCS2P54868 508 aa13.13□□□□□ -0.31
CLDND1-227ENST00000513452 SPP2Q13103 211 aa13.13□□□□□ -0.31
CLDND1-227ENST00000513452 LBHD1Q9BQE6 289 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-227ENST00000513452 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms