RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 COL26A1Q96A83 441 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 TSEN34Q9BSV6 310 aaKnown RBP6.58□□□□□ -1.36
HTT-211ENST00000513326 ZNF395Q9H8N7 513 aaPredicted RBP6.58□□□□□ -1.36
HTT-211ENST00000513326 RNMTO43148 476 aaKnown RBP6.57□□□□□ -1.36
HTT-211ENST00000513326 UPP2O95045 317 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 AMOTQ4VCS5 1084 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 CCDC93Q567U6 631 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 SND1Q7KZF4 910 aaKnown RBP eCLIP6.57□□□□□ -1.36
HTT-211ENST00000513326 SLC9A9Q8IVB4 645 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 STAG2Q8N3U4 1231 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 NBPF15Q8N660 670 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.57□□□□□ -1.36
HTT-211ENST00000513326 GJA3Q9Y6H8 435 aa6.57□□□□□ -1.36
HTT-211ENST00000513326 PPP1R12BO60237 982 aaPredicted RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 A1BGP04217 495 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 SCNN1AP37088 669 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 IARSP41252 1262 aaKnown RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 ECE1P42892 770 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 PSMA6P60900 246 aaKnown RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 PNMA8AQ86V59 439 aaPredicted RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 GPC2Q8N158 579 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 SYNE4Q8N205 404 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 VTI1AQ96AJ9 217 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 ZNF496Q96IT1 587 aaPredicted RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 PURBQ96QR8 312 aaKnown RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 GLIS2Q9BZE0 524 aaPredicted RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 IQSEC3Q9UPP2 1182 aaPredicted RBP6.56□□□□□ -1.36
HTT-211ENST00000513326 CHMP3Q9Y3E7 222 aa6.56□□□□□ -1.36
HTT-211ENST00000513326 SHTN1A0MZ66 631 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 PRAMEF22A3QJZ6 481 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 KCNQ3O43525 872 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 CELF2O95319 508 aaKnown RBP6.55□□□□□ -1.36
HTT-211ENST00000513326 AVPP01185 164 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 GTF2E1P29083 439 aaPredicted RBP6.55□□□□□ -1.36
HTT-211ENST00000513326 GPC1P35052 558 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 MAP2K2P36507 400 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 SERPINB4P48594 390 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 TBCELQ5QJ74 424 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 MKNK1Q9BUB5 465 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 C2orf49Q9BVC5 232 aaPredicted RBP6.55□□□□□ -1.36
HTT-211ENST00000513326 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
HTT-211ENST00000513326 FAM187AA6NFU0 413 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 SOWAHDA6NJG2 315 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 FAM177BA6PVY3 158 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 SPINT1O43278 529 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 HMOX1P09601 288 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 IL13P35225 146 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 RNF144AP50876 292 aaPredicted RBP6.54□□□□□ -1.36
HTT-211ENST00000513326 ST5P78524 1137 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 TEAD4Q15561 434 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 MTHFSDQ2M296 383 aaKnown RBP6.54□□□□□ -1.36
HTT-211ENST00000513326 AKAP4Q5JQC9 854 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 SOGA3Q5TF21 947 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 GTF3C2Q8WUA4 911 aaPredicted RBP6.54□□□□□ -1.36
HTT-211ENST00000513326 ZSCAN10Q96SZ4 725 aaPredicted RBP6.54□□□□□ -1.36
HTT-211ENST00000513326 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 ZNF408Q9H9D4 720 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 SEPT3Q9UH03 358 aa6.54□□□□□ -1.36
HTT-211ENST00000513326 A0A087WZG4 1122 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 FAM155AB1AL88 458 aaPredicted RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 NPHP1O15259 732 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 ABL1P00519 1130 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 NPR1P16066 1061 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 HIRAP54198 1017 aaPredicted RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 CCDC27Q2M243 656 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 TMEM214Q6NUQ4 689 aaKnown RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 CAPN12Q6ZSI9 719 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 NBPF5PQ86XG9 351 aaPredicted RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 TRPM4Q8TD43 1214 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 INSM2Q96T92 566 aaPredicted RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 NIFKQ9BYG3 293 aaKnown RBP6.53□□□□□ -1.36
HTT-211ENST00000513326 GRIP2Q9C0E4 1043 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 USP3Q9Y6I4 520 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 HEG1Q9ULI3 1381 aa6.53□□□□□ -1.36
HTT-211ENST00000513326 SIPA1L3O60292 1781 aaPredicted RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 TCERG1O14776 1098 aaKnown RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 CA12O43570 354 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 DGAT1O75907 488 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 STARD3NLO95772 234 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 BMP2P12643 396 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 NOS2P35228 1153 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 IL6STP40189 918 aaPredicted RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 NAA30Q147X3 362 aaPredicted RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 CTC1Q2NKJ3 1217 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 MRPL14Q6P1L8 145 aaKnown RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 RTKN2Q8IZC4 609 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 ZNF295-AS1Q8N0V1 137 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 RHBDD1Q8TEB9 315 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
HTT-211ENST00000513326 POLMQ9NP87 494 aaPredicted RBP6.52□□□□□ -1.37
HTT-211ENST00000513326 EML1O00423 815 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms