RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 USP17L5A8MUK1 530 aa12□□□□□ -0.49
TRIO-220ENST00000512979 LBX1P52954 281 aa12□□□□□ -0.49
TRIO-220ENST00000512979 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
TRIO-220ENST00000512979 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
TRIO-220ENST00000512979 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
TRIO-220ENST00000512979 STK32AQ8WU08 396 aa12□□□□□ -0.49
TRIO-220ENST00000512979 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
TRIO-220ENST00000512979 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
TRIO-220ENST00000512979 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 HRO43593 1189 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 AOC2O75106 756 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
TRIO-220ENST00000512979 IGHMBP2P38935 993 aaKnown RBP11.99□□□□□ -0.49
TRIO-220ENST00000512979 BCAMP50895 628 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRIO-220ENST00000512979 TMEM164Q5U3C3 297 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 DEPDC4Q8N2C3 294 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
TRIO-220ENST00000512979 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
TRIO-220ENST00000512979 NOVA2Q9UNW9 492 aaKnown RBP11.99□□□□□ -0.49
TRIO-220ENST00000512979 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 WTIPA6NIX2 430 aaPredicted RBP11.98□□□□□ -0.49
TRIO-220ENST00000512979 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 ADM5C9JUS6 153 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 ITGA6P23229 1130 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 CASP7P55210 303 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRIO-220ENST00000512979 PODNQ7Z5L7 613 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 GGA3Q9NZ52 723 aa11.98□□□□□ -0.49
TRIO-220ENST00000512979 MED23Q9ULK4 1368 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 F6X3S4 739 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 MAP2K2P36507 400 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
TRIO-220ENST00000512979 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
TRIO-220ENST00000512979 HUNKP57058 714 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
TRIO-220ENST00000512979 B4GALNT3Q6L9W6 998 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 MPHOSPH8Q99549 860 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
TRIO-220ENST00000512979 THSD7BQ9C0I4 1608 aa11.97□□□□□ -0.49
TRIO-220ENST00000512979 ZNF609O15014 1411 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
TRIO-220ENST00000512979 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 CSF1RP07333 972 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 CCNYL3P0C7X3 344 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 GMLQ99445 158 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 GBA2Q9HCG7 927 aaPredicted RBP11.96□□□□□ -0.49
TRIO-220ENST00000512979 CEP126Q9P2H0 1117 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
TRIO-220ENST00000512979 MYH3P11055 1940 aa11.96□□□□□ -0.5
TRIO-220ENST00000512979 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 ANKRD18BA2A2Z9 1011 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 PTK2Q05397 1052 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 SCARF1Q14162 830 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
TRIO-220ENST00000512979 C2orf69Q8N8R5 385 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 MYOZ2Q9NPC6 264 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
TRIO-220ENST00000512979 KLRK1P26718 216 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 KCNJ4P48050 445 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 CHRNDQ07001 517 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 TXNRD3Q86VQ6 643 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 MXD3Q9BW11 206 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
TRIO-220ENST00000512979 GPSM3Q9Y4H4 160 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
TRIO-220ENST00000512979 CACNA1FO60840 1977 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L21D6R901 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
TRIO-220ENST00000512979 FOXO4P98177 505 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 NOGQ13253 232 aa11.93□□□□□ -0.5
TRIO-220ENST00000512979 IFIT5Q13325 482 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms