RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 UBP1Q9NZI7 540 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 PRKAG2Q9UGJ0 569 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 EFR3BQ9Y2G0 817 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 SNCAIPQ9Y6H5 919 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 CC2D2AQ9P2K1 1620 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 PRAMEF27A3QJZ7 478 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 DCDC2CA8MYV0 355 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 DLL1O00548 723 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 RNGTTO60942 597 aaKnown RBP6.41□□□□□ -1.38
HTT-210ENST00000512909 AOC2O75106 756 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 STK10O94804 968 aaKnown RBP6.41□□□□□ -1.38
HTT-210ENST00000512909 GTF2F1P35269 517 aaKnown RBP eCLIP6.41□□□□□ -1.38
HTT-210ENST00000512909 NASPP49321 788 aaPredicted RBP6.41□□□□□ -1.38
HTT-210ENST00000512909 ETF1P62495 437 aaKnown RBP6.41□□□□□ -1.38
HTT-210ENST00000512909 ID3Q02535 119 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 ZNF252P-AS1Q0IIN9 211 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 GRIK4Q16099 956 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 ANKRD34AQ69YU3 496 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 ATXN3LQ9H3M9 355 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 CSADQ9Y600 493 aa6.41□□□□□ -1.38
HTT-210ENST00000512909 EIF4G1Q04637 1599 aaKnown RBP6.4□□□□□ -1.38
HTT-210ENST00000512909 IMPDH2P12268 514 aa6.4□□□□□ -1.38
HTT-210ENST00000512909 RXRBP28702 533 aa6.4□□□□□ -1.38
HTT-210ENST00000512909 PDZD3Q86UT5 571 aa6.4□□□□□ -1.38
HTT-210ENST00000512909 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
HTT-210ENST00000512909 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
HTT-210ENST00000512909 KCNK4Q9NYG8 393 aa6.4□□□□□ -1.38
HTT-210ENST00000512909 ADAM11O75078 769 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 ECEL1O95672 775 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 GJA8P48165 433 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
HTT-210ENST00000512909 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 WDR18Q9BV38 432 aa6.39□□□□□ -1.39
HTT-210ENST00000512909 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 U2SURPO15042 1029 aaKnown RBP6.38□□□□□ -1.39
HTT-210ENST00000512909 GREM1O60565 184 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 CILPO75339 1184 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 PLCG1P19174 1290 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 ASPAP45381 313 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 C12orf40Q86WS4 652 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 KCT2Q8NC54 265 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 RASGRP4Q8TDF6 673 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 UBXN4Q92575 508 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
HTT-210ENST00000512909 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 GINM1Q9NU53 330 aa6.38□□□□□ -1.39
HTT-210ENST00000512909 ZNF862O60290 1169 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 PGRP06401 933 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 EIF6P56537 245 aaKnown RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 SOX4Q06945 474 aaPredicted RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 LRRFIP1Q32MZ4 808 aaKnown RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 SOGA3Q5TF21 947 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 RASIP1Q5U651 963 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 AGGF1Q8N302 714 aaeCLIP6.37□□□□□ -1.39
HTT-210ENST00000512909 FBXO27Q8NI29 283 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 ZNF507Q8TCN5 953 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 GAL3ST3Q96A11 431 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 LENG1Q96BZ8 264 aaPredicted RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 HIRIP3Q9BW71 556 aaPredicted RBP6.37□□□□□ -1.39
HTT-210ENST00000512909 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 KCNQ5Q9NR82 932 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
HTT-210ENST00000512909 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
HTT-210ENST00000512909 WISP1O95388 367 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 ADH5P11766 374 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
HTT-210ENST00000512909 GARTP22102 1010 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 ERVK-24P63145 666 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 LRFN4Q6PJG9 635 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 TMEM130Q8N3G9 435 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 SMG8Q8ND04 991 aaKnown RBP6.36□□□□□ -1.39
HTT-210ENST00000512909 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 TRIM55Q9BYV6 548 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 TACC3Q9Y6A5 838 aa6.36□□□□□ -1.39
HTT-210ENST00000512909 SYNGAP1Q96PV0 1343 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 FAM221AA4D161 298 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 FANCGO15287 622 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 CTSBP07858 339 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 RAB6AP20340 208 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 IREB2P48200 963 aaKnown RBP6.35□□□□□ -1.39
HTT-210ENST00000512909 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms