RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 FOXP4Q8IVH2 680 aaPredicted RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 FANCLQ9NW38 375 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 DENND2AQ9ULE3 1009 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 PCDHA5Q9Y5H7 936 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 ZBTB43O43298 467 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 URI1O94763 535 aaPredicted RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 ZNF18P17022 549 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 BMP6P22004 513 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 TRIM29Q14134 588 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 ALX1Q15699 326 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 CNNM3Q8NE01 707 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 IGDCC4Q8TDY8 1250 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 CLIC6Q96NY7 704 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 UTP14AQ9BVJ6 771 aaKnown RBP13.29□□□□□ -0.28
SNX25-205ENST00000512853 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
SNX25-205ENST00000512853 IFIT5Q13325 482 aaKnown RBP13.28□□□□□ -0.28
SNX25-205ENST00000512853 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
SNX25-205ENST00000512853 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
SNX25-205ENST00000512853 PHKBQ93100 1093 aa13.28□□□□□ -0.28
SNX25-205ENST00000512853 CARD6Q9BX69 1037 aa13.28□□□□□ -0.28
SNX25-205ENST00000512853 SENP2Q9HC62 589 aa13.28□□□□□ -0.28
SNX25-205ENST00000512853 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
SNX25-205ENST00000512853 MAN1B1Q9UKM7 699 aa13.28□□□□□ -0.28
SNX25-205ENST00000512853 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.28□□□□□ -0.28
SNX25-205ENST00000512853 STX10O60499 249 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.28
SNX25-205ENST00000512853 CYP2C19P33261 490 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 LIFRP42702 1097 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 MAP3K9P80192 1104 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 MICU3Q86XE3 530 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 STK11IPQ8N1F8 1099 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 TRIML1Q8N9V2 468 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.28
SNX25-205ENST00000512853 ENOX1Q8TC92 643 aaKnown RBP13.27□□□□□ -0.28
SNX25-205ENST00000512853 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.28
SNX25-205ENST00000512853 PIH1D3Q9NQM4 214 aaKnown RBP13.27□□□□□ -0.28
SNX25-205ENST00000512853 DACH1Q9UI36 760 aa13.27□□□□□ -0.28
SNX25-205ENST00000512853 TCRBV5S4A2TA0A5A2 114 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 B4E1Z4 1266 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 RXRAP19793 462 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 SARSP49591 514 aaKnown RBP13.27□□□□□ -0.29
SNX25-205ENST00000512853 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 VGLL2Q8N8G2 317 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 MLKLQ8NB16 471 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 WASF1Q92558 559 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 FBXO2Q9UK22 296 aaPredicted RBP13.27□□□□□ -0.29
SNX25-205ENST00000512853 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.29
SNX25-205ENST00000512853 SPATA31A3Q5VYP0 1347 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 PDE6AP16499 860 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 IFNAR1P17181 557 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 PTPREP23469 700 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 ARID4AP29374 1257 aaPredicted RBP13.26□□□□□ -0.29
SNX25-205ENST00000512853 CASQ1P31415 396 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
SNX25-205ENST00000512853 MORC3Q14149 939 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 POSTNQ15063 836 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 SPECC1LQ69YQ0 1117 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 RSRC2Q7L4I2 434 aaKnown RBP13.26□□□□□ -0.29
SNX25-205ENST00000512853 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
SNX25-205ENST00000512853 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 BCORQ6W2J9 1755 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 ZNF532Q9HCE3 1301 aa13.26□□□□□ -0.29
SNX25-205ENST00000512853 FOXN1O15353 648 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 MMP1P03956 469 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 FMR1Q06787 632 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX25-205ENST00000512853 TMEM67Q5HYA8 995 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 GPR161Q8N6U8 529 aaKnown RBP13.25□□□□□ -0.29
SNX25-205ENST00000512853 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
SNX25-205ENST00000512853 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.25□□□□□ -0.29
SNX25-205ENST00000512853 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 ATF3P18847 181 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
SNX25-205ENST00000512853 PPP2R3AQ06190 1150 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
SNX25-205ENST00000512853 WDR24Q96S15 920 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms