RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 ADGRL2O95490 1459 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 PDE8AO60658 829 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 MYRIPQ8NFW9 859 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 VPS16Q9H269 839 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 STK24Q9Y6E0 443 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 GTF2A1P52655 376 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-210ENST00000512756 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 FAM89AQ96GI7 184 aa13.99□□□□□ -0.17
COL11A1-210ENST00000512756 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 PAK1Q13153 545 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 RAPGEF1Q13905 1077 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 CEP128Q6ZU80 1094 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 POLR2DO15514 142 aaKnown RBP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 HAUS3Q68CZ6 603 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 CABLES1Q8TDN4 633 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 NCOA5Q9HCD5 579 aaKnown RBP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 TLDC2A0PJX2 215 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 TTC38Q5R3I4 469 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 CSGALNACT2Q8N6G5 542 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 V9GY48 417 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 GJC1P36383 396 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 SH2D4AQ9H788 454 aa13.98□□□□□ -0.17
COL11A1-210ENST00000512756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL11A1-210ENST00000512756 ATP5DP30049 168 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-210ENST00000512756 PIK3AP1Q6ZUJ8 805 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
COL11A1-210ENST00000512756 FAM173BQ6P4H8 233 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 TEX11Q8IYF3 940 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 SUCLG2Q96I99 432 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 CCDC114Q96M63 670 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 CSRNP2Q9H175 543 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 GCKRQ14397 625 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 ARMT1Q9H993 441 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-210ENST00000512756 CETN3O15182 167 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 HIBADHP31937 336 aaKnown RBP13.97□□□□□ -0.17
COL11A1-210ENST00000512756 KRT40Q6A162 431 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 C8orf74Q6P047 294 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 LPIN2Q92539 896 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
COL11A1-210ENST00000512756 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-210ENST00000512756 ATP5JP18859 108 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.17
COL11A1-210ENST00000512756 B4GALNT4Q76KP1 1039 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 CDCA7Q9BWT1 371 aaPredicted RBP13.96□□□□□ -0.17
COL11A1-210ENST00000512756 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
COL11A1-210ENST00000512756 KCNA6P17658 529 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 U2AF2P26368 475 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL11A1-210ENST00000512756 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 NFE2L3Q9Y4A8 694 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 ABCC4O15439 1325 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 GPR161Q8N6U8 529 aaKnown RBP13.96□□□□□ -0.17
COL11A1-210ENST00000512756 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 LZTS2Q9BRK4 669 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 SLC52A2Q9HAB3 445 aa13.96□□□□□ -0.17
COL11A1-210ENST00000512756 NCKAP5LQ9HCH0 1330 aa13.96□□□□□ -0.18
COL11A1-210ENST00000512756 ALDH3A1P30838 453 aa13.96□□□□□ -0.18
COL11A1-210ENST00000512756 CROCCP2Q86T23 111 aa13.96□□□□□ -0.18
COL11A1-210ENST00000512756 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.18
COL11A1-210ENST00000512756 NOX5Q96PH1 765 aa13.96□□□□□ -0.18
COL11A1-210ENST00000512756 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 POSTNQ15063 836 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 ARHGEF10O15013 1369 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 CCDC25Q86WR0 208 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 CCDC63Q8NA47 563 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 NKIRAS1Q9NYS0 192 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 PTPRTO14522 1441 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 IFT20Q8IY31 132 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 SECISBP2LQ93073 1101 aaKnown RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 KCNK9Q9NPC2 374 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 GABPB1Q06547 395 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
COL11A1-210ENST00000512756 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
COL11A1-210ENST00000512756 NONOQ15233 471 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL11A1-210ENST00000512756 TOM1O60784 492 aa13.94□□□□□ -0.18
COL11A1-210ENST00000512756 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
COL11A1-210ENST00000512756 ASIC2Q16515 512 aa13.94□□□□□ -0.18
COL11A1-210ENST00000512756 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
COL11A1-210ENST00000512756 SMIM23A6NLE4 172 aa13.94□□□□□ -0.18
COL11A1-210ENST00000512756 KRT9P35527 623 aa13.94□□□□□ -0.18
COL11A1-210ENST00000512756 WDR44Q5JSH3 913 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms