RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DZIP1Q86YF9 867 aaKnown RBP15.55■□□□□ 0.08
VEGFA-216ENST00000512683 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 TBC1D2Q9BYX2 928 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 ARHGAP39Q9C0H5 1083 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 AFG3L2Q9Y4W6 797 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 ZHX2Q9Y6X8 837 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 A0A0G2JLL6 359 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-216ENST00000512683 SRGAP3O43295 1099 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 BCRP11274 1271 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 UBXN2AP68543 259 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 PRRT2Q7Z6L0 340 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-216ENST00000512683 ZSCAN29Q8IWY8 852 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-216ENST00000512683 ZFPM1Q8IX07 1006 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 XAGE2Q96GT9 111 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
VEGFA-216ENST00000512683 PA2G4Q9UQ80 394 aaKnown RBP15.54■□□□□ 0.08
VEGFA-216ENST00000512683 ATRNL1Q5VV63 1379 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 A0A1B0GUL7 405 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 GJB1P08034 283 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 OSBPP22059 807 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 MEIS3Q99687 375 aa15.53■□□□□ 0.08
VEGFA-216ENST00000512683 HTTP42858 3142 aa15.52■□□□□ 0.08
VEGFA-216ENST00000512683 GJA8P48165 433 aa15.52■□□□□ 0.08
VEGFA-216ENST00000512683 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
VEGFA-216ENST00000512683 SLAIN1Q8ND83 568 aa15.52■□□□□ 0.08
VEGFA-216ENST00000512683 MROH7-TTC4A0A0A0MT08 1334 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 GNAI2P04899 355 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 UQCRFS1P1P0C7P4 283 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 CTGFP29279 349 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 ADORA1P30542 326 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 BTDP43251 543 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 TFCP2Q12800 502 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 IRF5Q13568 498 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 PXYLP1Q8TE99 480 aa15.51■□□□□ 0.07
VEGFA-216ENST00000512683 OSBPL5Q9H0X9 879 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-216ENST00000512683 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-216ENST00000512683 RHBDL3P58872 404 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 MECOMQ03112 1051 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
VEGFA-216ENST00000512683 SPATA5Q8NB90 893 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 PROCA1Q8NCQ7 364 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-216ENST00000512683 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 HTATIP2Q9BUP3 242 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
VEGFA-216ENST00000512683 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 BCAR3O75815 825 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 CYP2C8P10632 490 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.07
VEGFA-216ENST00000512683 ATF7IPQ6VMQ6 1270 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 NSUN4Q96CB9 384 aaKnown RBP15.49■□□□□ 0.07
VEGFA-216ENST00000512683 GPR108Q9NPR9 543 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 AGTPBP1Q9UPW5 1226 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
VEGFA-216ENST00000512683 CCL5P13501 91 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 ARID4AP29374 1257 aaPredicted RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 PRKCZQ05513 592 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 MTFR1Q15390 333 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 UBE2Q1Q7Z7E8 422 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 RNF208Q9H0X6 261 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 DHX36Q9H2U1 1008 aaKnown RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.073e-7■■■■■ 34.2
VEGFA-216ENST00000512683 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 GINM1Q9NU53 330 aa15.48■□□□□ 0.07
VEGFA-216ENST00000512683 BIN2Q9UBW5 565 aaPredicted RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
VEGFA-216ENST00000512683 ADCY3O60266 1144 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 BAG3O95817 575 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 TRIM27P14373 513 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 PLCG2P16885 1265 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-216ENST00000512683 PICALMQ13492 652 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 GADL1Q6ZQY3 521 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 ZNF280CQ8ND82 737 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 COA7Q96BR5 231 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 PI4KBQ9UBF8 816 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
VEGFA-216ENST00000512683 H0YGN5 161 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 SGPL1O95470 568 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 MYCP01106 439 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 CAP2P40123 477 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 FLT3LGP49771 235 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 PPP4CP60510 307 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 FAM110CQ1W6H9 321 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 TMED8Q6PL24 325 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 FOXP4Q8IVH2 680 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 DPF3Q92784 378 aa15.46■□□□□ 0.07
VEGFA-216ENST00000512683 ZNF512BQ96KM6 892 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 NOL10Q9BSC4 688 aaKnown RBP15.46■□□□□ 0.07
VEGFA-216ENST00000512683 AS3MTQ9HBK9 375 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms