RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 PPARAQ07869 468 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 TGFBRAP1Q8WUH2 860 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 IDI2Q9BXS1 227 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 FLT1P17948 1338 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 HMGB1P09429 215 aaKnown RBP11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 CPA1P15085 419 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 USP5P45974 858 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 AKNAD1Q5T1N1 836 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 C12orf60Q5U649 245 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 STAG1Q8WVM7 1258 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 CYP46A1Q9Y6A2 500 aa11.85□□□□□ -0.51
PDGFRA-209ENST00000512143 ROBO3Q96MS0 1386 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 CYP2D7A0A087X1C5 515 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 ST18O60284 1047 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 GRIN3BO60391 1043 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 CYP2D6P10635 497 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 PCP11498 1178 aaKnown RBP11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 GMPSP49915 693 aaPredicted RBP11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 EVX2Q03828 476 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 NFIAQ12857 509 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 GPC2Q8N158 579 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 AGXT2Q9BYV1 514 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 NAV1Q8NEY1 1877 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 LAMB1P07942 1786 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
PDGFRA-209ENST00000512143 SHTN1A0MZ66 631 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 MCM2P49736 904 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 PLCD1P51178 756 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 GPR162Q16538 588 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 NCOA7Q8NI08 942 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 MYH1P12882 1939 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 NEDD4P46934 1319 aa11.83□□□□□ -0.52
PDGFRA-209ENST00000512143 ORC4O43929 436 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 ENTPD3O75355 529 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 AK2P54819 239 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 ANTXR2P58335 489 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 BECN1Q14457 450 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 FKBP1CQ5VVH2 108 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 CNNM2Q9H8M5 875 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 GJA3Q9Y6H8 435 aa11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 COL2A1P02458 1487 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-209ENST00000512143 K7ELQ4 463 aaPredicted RBP11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 WNT10BO00744 389 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 EGFRP00533 1210 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 MCM5P33992 734 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 NT5C2P49902 561 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 EVCP57679 992 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 GABPAQ06546 454 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 TRDNQ13061 729 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 CYB5R4Q7L1T6 521 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 HSCBQ8IWL3 235 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 KRT23Q9C075 422 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms