RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SSBP05455 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPNE4-208ENST00000511604 MYL1P05976 194 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 ALDH1B1P30837 517 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 DPCR1Q3MIW9 517 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 ACCSLQ4AC99 568 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 RNF187Q5TA31 235 aaPredicted RBP8.29□□□□□ -1.08
CPNE4-208ENST00000511604 WDR93Q6P2C0 686 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 ARHGAP22Q7Z5H3 698 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 SPAG5Q96R06 1193 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 PAGR1Q9BTK6 254 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 YIPF2Q9BWQ6 316 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
CPNE4-208ENST00000511604 PNPLA6Q8IY17 1366 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 RBM47A0AV96 593 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TMEM232C9JQI7 657 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TPD52L2O43399 206 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 GCLCP48506 637 aaPredicted RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 STIM1Q13586 685 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TMEM139Q8IV31 216 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 CCAR1Q8IX12 1150 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 NSMCE1Q8WV22 266 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 SH3GL2Q99962 352 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 PAPOLBQ9NRJ5 636 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 STAP2Q9UGK3 403 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TULP4Q9NRJ4 1543 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ADGRL3Q9HAR2 1447 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ATP5JP18859 108 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ZBED6P86452 979 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 DRP2Q13474 957 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 TRIM58Q8NG06 486 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 RASSF8Q8NHQ8 419 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 SMARCC2Q8TAQ2 1214 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 COG1Q8WTW3 980 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC47Q96A33 483 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ACSBG1Q96GR2 724 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC114Q96M63 670 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 LZTS2Q9BRK4 669 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 C14orf93Q9H972 538 aaKnown RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ZSWIM6Q9HCJ5 1215 aa8.28□□□□□ -1.08
CPNE4-208ENST00000511604 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
CPNE4-208ENST00000511604 ARHGAP5Q13017 1502 aa8.27□□□□□ -1.08
CPNE4-208ENST00000511604 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.08
CPNE4-208ENST00000511604 AGPSO00116 658 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 FERP16591 822 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 PDCP20941 246 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 HSP90AA4PQ58FG1 418 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 MFSD4BQ5TF39 518 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 BICD1Q96G01 975 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 RBM17Q96I25 401 aaKnown RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 RANBP17Q9H2T7 1088 aaKnown RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 EBF2Q9HAK2 575 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 U3KPZ7 1027 aaPredicted RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 A6NNZ2 444 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 HMMRO75330 724 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 RNF8O76064 485 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 IFFO1Q0D2I5 559 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 RESTQ13127 1097 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 RASA3Q14644 834 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 KARSQ15046 597 aaKnown RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 DBN1Q16643 649 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 TUBB8Q3ZCM7 444 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 TOGARAM2Q6ZUX3 1019 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 HSD3B7Q9H2F3 369 aa8.27□□□□□ -1.09
CPNE4-208ENST00000511604 MMADHCQ9H3L0 296 aaPredicted RBP8.27□□□□□ -1.09
CPNE4-208ENST00000511604 KDRP35968 1356 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 OPA1O60313 960 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 RAB11FIP3O75154 756 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 CTAGE8P0CG41 777 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 PAX3P23760 479 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 MYO1EQ12965 1108 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 TOB2Q14106 344 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 LRRC23Q53EV4 343 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 MTHFD1LQ6UB35 978 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 CTAGE6Q86UF2 777 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 CTAGE4Q8IX94 777 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 RBM41Q96IZ5 413 aaKnown RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 ZSCAN31Q96LW9 406 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 ACTR5Q9H9F9 607 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 HOOK1Q9UJC3 728 aaKnown RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 TUBGCP6Q96RT7 1819 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 PFKFB2O60825 505 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 KIF4AO95239 1232 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms