RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 AP4E1Q9UPM8 1137 aa6.94□□□□□ -1.3
HMGB3P13-201ENST00000511263 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 ENC1O14682 589 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 TIAF1O95411 115 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 ADH5P11766 374 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 MAP7Q14244 749 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 PAOXQ6QHF9 649 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 ABI1Q8IZP0 508 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 PIDD1Q9HB75 910 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 USP31Q70CQ4 1352 aa6.93□□□□□ -1.3
HMGB3P13-201ENST00000511263 ID3Q02535 119 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 KIF4BQ2VIQ3 1234 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 MAP1SQ66K74 1059 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 DYMQ7RTS9 669 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 PICK1Q9NRD5 415 aa6.92□□□□□ -1.3
HMGB3P13-201ENST00000511263 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 FBXO24O75426 580 aa6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 ASPAP45381 313 aa6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 RELL1Q8IUW5 271 aa6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 CCDC86Q9H6F5 360 aaKnown RBP6.91□□□□□ -1.3
HMGB3P13-201ENST00000511263 FAM95CA0A1B0GW59 222 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 F13BP05160 661 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 FZD5Q13467 585 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 PDZD3Q86UT5 571 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
HMGB3P13-201ENST00000511263 DLGAP3O95886 979 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 LIG1P18858 919 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 BMP6P22004 513 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 FAM9AQ8IZU1 332 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 KCT2Q8NC54 265 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 C2CD4AQ8NCU7 369 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 ELMO3Q96BJ8 720 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 MIR1-1HGQ9H1L0 117 aa6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 ZCCHC6Q5VYS8 1495 aaKnown RBP6.89□□□□□ -1.31
HMGB3P13-201ENST00000511263 ABCC9O60706 1549 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 CELA3AP09093 270 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 DRD2P14416 443 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 ERVK-24P63145 666 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 NFKBIBQ15653 356 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 HDXQ7Z353 690 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 CRIM1Q9NZV1 1036 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
HMGB3P13-201ENST00000511263 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 ECEL1O95672 775 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 CTSBP07858 339 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 LIG3P49916 1009 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 MEI1Q5TIA1 1274 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 AGMOQ6ZNB7 445 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 CDC37L1Q7L3B6 337 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 CCDC84Q86UT8 332 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 GPBAR1Q8TDU6 330 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 EZH1Q92800 747 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 GSX1Q9H4S2 264 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 LEMD3Q9Y2U8 911 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 ACTL7BQ9Y614 415 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 SNCAIPQ9Y6H5 919 aa6.87□□□□□ -1.31
HMGB3P13-201ENST00000511263 FANCGO15287 622 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 ZNF862O60290 1169 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 PAGE1O75459 146 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 BPNT1O95861 308 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 RAB6AP20340 208 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 RNF214Q8ND24 703 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 FBLIM1Q8WUP2 373 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 ATG3Q9NT62 314 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 CCDC39Q9UFE4 941 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
HMGB3P13-201ENST00000511263 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 CTSHP09668 335 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 FOSL1P15407 271 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 VAMP1P23763 118 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 TSNAXIP1Q2TAA8 658 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 ZC3H12AQ5D1E8 599 aaKnown RBP6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms