RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 FOXD4L4Q8WXT5 416 aaPredicted RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 WNT8BQ93098 351 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 LRRC59Q96AG4 307 aaKnown RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 BHLHE41Q9C0J9 482 aaPredicted RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 SEC31BQ9NQW1 1179 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 TET3O43151 1660 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 TROQ12816 1431 aaPredicted RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 BRWD3Q6RI45 1802 aa8.96□□□□□ -0.97
GYPB-212ENST00000511198 FAM177BA6PVY3 158 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 NDUFB5O43674 189 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 PRELPP51888 382 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 CABP4P57796 275 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 BSNDQ8WZ55 320 aa8.96□□□□□ -0.98
GYPB-212ENST00000511198 UNC13BO14795 1591 aa8.95□□□□□ -0.98
GYPB-212ENST00000511198 USPL1Q5W0Q7 1092 aa8.95□□□□□ -0.98
GYPB-212ENST00000511198 GALNT12Q8IXK2 581 aa8.95□□□□□ -0.98
GYPB-212ENST00000511198 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
GYPB-212ENST00000511198 UBL7Q96S82 380 aaPredicted RBP8.95□□□□□ -0.98
GYPB-212ENST00000511198 GNEQ9Y223 722 aaKnown RBP8.95□□□□□ -0.98
GYPB-212ENST00000511198 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
GYPB-212ENST00000511198 SOWAHDA6NJG2 315 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
GYPB-212ENST00000511198 KIF3BO15066 747 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 PRR23CQ6ZRP0 262 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 ACAD11Q709F0 780 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 UBASH3BQ8TF42 649 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 CITED4Q96RK1 184 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 NINLQ9Y2I6 1382 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 SYCP2Q9BX26 1530 aa8.94□□□□□ -0.98
GYPB-212ENST00000511198 A0A1W2PP55 124 aa8.93□□□□□ -0.98
GYPB-212ENST00000511198 BRD1O95696 1058 aa8.93□□□□□ -0.98
GYPB-212ENST00000511198 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
GYPB-212ENST00000511198 ORC1Q13415 861 aa8.93□□□□□ -0.98
GYPB-212ENST00000511198 SLC7A3Q8WY07 619 aa8.93□□□□□ -0.98
GYPB-212ENST00000511198 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
GYPB-212ENST00000511198 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.93□□□□□ -0.98
GYPB-212ENST00000511198 CAMSAP2Q08AD1 1489 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
GYPB-212ENST00000511198 METTL12A8MUP2 240 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 GPR182O15218 404 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 GLB1P16278 677 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 ZMYM1Q5SVZ6 1142 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 Q8N3U1 123 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 ASAP3Q8TDY4 903 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 TCF12Q99081 682 aa8.92□□□□□ -0.98
GYPB-212ENST00000511198 ERVK-7P63135 1459 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 TMEM2Q9UHN6 1383 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 ATF3P18847 181 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 NLRP12P59046 1061 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 C19orf57Q0VDD7 668 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 IKBKEQ14164 716 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 CCNJLQ8IV13 435 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 RBCK1Q9BYM8 510 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 C19orf44Q9H6X5 657 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 PPP1R1BQ9UD71 204 aaPredicted RBP8.91□□□□□ -0.98
GYPB-212ENST00000511198 CDC42BPAQ5VT25 1732 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
GYPB-212ENST00000511198 GLI3P10071 1580 aa8.9□□□□□ -0.98
GYPB-212ENST00000511198 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.98
GYPB-212ENST00000511198 NEFLP07196 543 aa8.9□□□□□ -0.98
GYPB-212ENST00000511198 ESRRAP11474 423 aaPredicted RBP8.9□□□□□ -0.98
GYPB-212ENST00000511198 ARMC10Q8N2F6 343 aa8.9□□□□□ -0.98
GYPB-212ENST00000511198 SPHKAPQ2M3C7 1700 aa8.9□□□□□ -0.98
GYPB-212ENST00000511198 CHD4Q14839 1912 aa8.9□□□□□ -0.99
GYPB-212ENST00000511198 RALGAPBQ86X10 1494 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 ARHGAP35Q9NRY4 1499 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 NCOA3Q9Y6Q9 1424 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 CPNE3O75131 537 aaKnown RBP8.89□□□□□ -0.99
GYPB-212ENST00000511198 GRIA4P48058 902 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 ARL4DP49703 201 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 XP32Q5T750 250 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 KIAA0319Q5VV43 1072 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 FAM46AQ96IP4 442 aaKnown RBP8.89□□□□□ -0.99
GYPB-212ENST00000511198 CEP41Q9BYV8 373 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 NIF3L1Q9GZT8 377 aa8.89□□□□□ -0.99
GYPB-212ENST00000511198 SOX17Q9H6I2 414 aaPredicted RBP8.89□□□□□ -0.99
GYPB-212ENST00000511198 CLIP1P30622 1438 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 A0A096LPE4 126 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 A0A1W2PPZ6 126 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 EZH2Q15910 746 aaKnown RBP8.88□□□□□ -0.99
GYPB-212ENST00000511198 SPRED3Q2MJR0 410 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 SPON1Q9HCB6 807 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 CHD2O14647 1828 aaKnown RBP8.88□□□□□ -0.99
GYPB-212ENST00000511198 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
GYPB-212ENST00000511198 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
GYPB-212ENST00000511198 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
GYPB-212ENST00000511198 ALKBH8Q96BT7 664 aaKnown RBP8.87□□□□□ -0.99
GYPB-212ENST00000511198 DNAJC25Q9H1X3 360 aa8.87□□□□□ -0.99
GYPB-212ENST00000511198 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
GYPB-212ENST00000511198 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
GYPB-212ENST00000511198 MEGF11A6BM72 1044 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 EIF1AYO14602 144 aaKnown RBP8.86□□□□□ -0.99
GYPB-212ENST00000511198 KCNQ2O43526 872 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 HSPA6P17066 643 aa8.86□□□□□ -0.99
GYPB-212ENST00000511198 ZNF423Q2M1K9 1284 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms