RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 IFT20Q8IY31 132 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 CCDC110Q8TBZ0 833 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEK1-206ENST00000510533 DENND2AQ9ULE3 1009 aa11.86□□□□□ -0.51
NEK1-206ENST00000510533 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
NEK1-206ENST00000510533 GOLGA6CA6NDK9 693 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 GOLGA6DP0CG33 693 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 GOLGA6AQ9NYA3 693 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 STMN2Q93045 179 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 NOX5Q96PH1 765 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 MAK16Q9BXY0 300 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 ABCC1P33527 1531 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 UHRF1BP1LA0JNW5 1464 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 ASIC2Q16515 512 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 ZNF202O95125 648 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 TIMM10P62072 90 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 PAXIP1Q6ZW49 1069 aaPredicted RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 C17orf53Q8N3J3 647 aaPredicted RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 UTP11Q9Y3A2 253 aaKnown RBP11.85□□□□□ -0.51
NEK1-206ENST00000510533 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
NEK1-206ENST00000510533 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
NEK1-206ENST00000510533 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
NEK1-206ENST00000510533 GABPB1Q06547 395 aaPredicted RBP11.84□□□□□ -0.51
NEK1-206ENST00000510533 CIB2O75838 187 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 KRT5P13647 590 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 WDR44Q5JSH3 913 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 APPBP2Q92624 585 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 DBNDD2Q9BQY9 259 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
NEK1-206ENST00000510533 ATP11AP98196 1134 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
NEK1-206ENST00000510533 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
NEK1-206ENST00000510533 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.51
NEK1-206ENST00000510533 NAA25Q14CX7 972 aa11.83□□□□□ -0.51
NEK1-206ENST00000510533 DDB1Q16531 1140 aa11.83□□□□□ -0.51
NEK1-206ENST00000510533 LMBRD1Q9NUN5 540 aa11.83□□□□□ -0.51
NEK1-206ENST00000510533 BACH1O14867 736 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 CETN3O15182 167 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 CALUO43852 315 aaPredicted RBP11.83□□□□□ -0.52
NEK1-206ENST00000510533 INPP5BP32019 993 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 TPD52P55327 224 aaPredicted RBP11.83□□□□□ -0.52
NEK1-206ENST00000510533 BIRC3Q13489 604 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 UAP1Q16222 522 aaPredicted RBP11.83□□□□□ -0.52
NEK1-206ENST00000510533 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 BABAM1Q9NWV8 329 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 NFE2L3Q9Y4A8 694 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 HOXC9P31274 260 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 UBL4BQ8N7F7 174 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 ARMT1Q9H993 441 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 CCNT1O60563 726 aaKnown RBP11.83□□□□□ -0.52
NEK1-206ENST00000510533 CLUL1Q15846 466 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
NEK1-206ENST00000510533 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
NEK1-206ENST00000510533 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 AGTPBP1Q9UPW5 1226 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 GOLGA6BA6NDN3 693 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 GPAA1O43292 621 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 KRT9P35527 623 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 CROCCP2Q86T23 111 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 JAG2Q9Y219 1238 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 STX10O60499 249 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 TAB2Q9NYJ8 693 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 A0A1B0GUA9 196 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
NEK1-206ENST00000510533 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
NEK1-206ENST00000510533 POSTNQ15063 836 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 PUM3Q15397 648 aaKnown RBP11.82□□□□□ -0.52
NEK1-206ENST00000510533 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 ITGA6P23229 1130 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 TXKP42681 527 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 MAGEA1P43355 309 aa11.82□□□□□ -0.52
NEK1-206ENST00000510533 A2MP01023 1474 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 HOXB7P09629 217 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms