RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 TGFBR3LH3BV60 316 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 SLC19A1P41440 591 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 FCGRTP55899 365 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 GRM2Q14416 872 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 BTLAQ7Z6A9 289 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
NEK1-204ENST00000509912 BMP1P13497 986 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 ZNF697Q5TEC3 545 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 Q6ZVU0 165 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 RUBCNLQ9H714 662 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 MRC1P22897 1456 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 WNT7AO00755 349 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 STK10O94804 968 aaKnown RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 HIRAP54198 1017 aaPredicted RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 NGDNQ8NEJ9 315 aaKnown RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 MAP2P11137 1827 aaKnown RBP6.72□□□□□ -1.33
NEK1-204ENST00000509912 XYLBO75191 536 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 INPP5BP32019 993 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 CRKP46108 304 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 HPS1Q92902 700 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 TRAK1Q9UPV9 953 aa6.72□□□□□ -1.33
NEK1-204ENST00000509912 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
NEK1-204ENST00000509912 CDAN1Q8IWY9 1227 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 CEP63Q96MT8 703 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 PRDM11Q9NQV5 511 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 PPT2Q9UMR5 302 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 SASH3O75995 380 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 GGCXP38435 758 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 SDE2Q6IQ49 451 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
NEK1-204ENST00000509912 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 TESK2Q96S53 571 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 OSBPL2Q9H1P3 480 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 TERF2IPQ9NYB0 399 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 TAF1LQ8IZX4 1826 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 WASHC2AQ641Q2 1341 aa6.71□□□□□ -1.34
NEK1-204ENST00000509912 CELA3AP09093 270 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
NEK1-204ENST00000509912 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 GMLQ99445 158 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 PKD2L1Q9P0L9 805 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 COL5A3P25940 1745 aaPredicted RBP6.7□□□□□ -1.34
NEK1-204ENST00000509912 TLDC2A0PJX2 215 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 FAM221BA6H8Z2 402 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 GCP02774 474 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 SSBP05455 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
NEK1-204ENST00000509912 SPRYD7Q5W111 196 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 SNX29Q8TEQ0 813 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 IP6K1Q92551 441 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 BTAF1O14981 1849 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 ROCK2O75116 1388 aaKnown RBP6.7□□□□□ -1.34
NEK1-204ENST00000509912 RGPD5Q99666 1765 aa6.7□□□□□ -1.34
NEK1-204ENST00000509912 TTC24A2A3L6 582 aaPredicted RBP6.69□□□□□ -1.34
NEK1-204ENST00000509912 RAB11FIP3O75154 756 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 GJA8P48165 433 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 FBXL19Q6PCT2 694 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 ST7Q9NRC1 585 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 GINM1Q9NU53 330 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 NRXN2Q9P2S2 1712 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 CES1P23141 567 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 NBPF1Q3BBV0 1214 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 KANK3Q6NY19 840 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 C3orf58Q8NDZ4 430 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 KDRP35968 1356 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 DCDC2BA2VCK2 349 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 K7ELQ4 463 aaPredicted RBP6.69□□□□□ -1.34
NEK1-204ENST00000509912 TLR3O15455 904 aaKnown RBP6.69□□□□□ -1.34
NEK1-204ENST00000509912 ITGBL1O95965 494 aaPredicted RBP6.69□□□□□ -1.34
NEK1-204ENST00000509912 RPIAP49247 311 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 GNASQ5JWF2 1037 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 PLD4Q96BZ4 506 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 HCN2Q9UL51 889 aa6.69□□□□□ -1.34
NEK1-204ENST00000509912 TYRO3Q06418 890 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 SEPT6Q14141 434 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 R3HDM1Q15032 1099 aaKnown RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 EGFLAMQ63HQ2 1017 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 FLAD1Q8NFF5 587 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 EAF1Q96JC9 268 aaPredicted RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 SRPK1Q96SB4 655 aaKnown RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 EZH2Q15910 746 aaKnown RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 FAM169BQ8N8A8 192 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 SLC43A3Q8NBI5 491 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 FBXO27Q8NI29 283 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
NEK1-204ENST00000509912 GRIP2Q9C0E4 1043 aa6.68□□□□□ -1.34
NEK1-204ENST00000509912 KTN1Q86UP2 1357 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms