RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 ZFPM1Q8IX07 1006 aa19.83■□□□□ 0.76
SKP2-205ENST00000509692 CSRNP1Q96S65 589 aa19.83■□□□□ 0.76
SKP2-205ENST00000509692 IREB2P48200 963 aaKnown RBP19.82■□□□□ 0.76
SKP2-205ENST00000509692 MKRN3Q13064 507 aaKnown RBP19.82■□□□□ 0.76
SKP2-205ENST00000509692 TTC22Q5TAA0 569 aa19.82■□□□□ 0.76
SKP2-205ENST00000509692 IDI2Q9BXS1 227 aa19.82■□□□□ 0.76
SKP2-205ENST00000509692 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.82■□□□□ 0.76
SKP2-205ENST00000509692 WDHD1O75717 1129 aaPredicted RBP19.81■□□□□ 0.76
SKP2-205ENST00000509692 LDHCP07864 332 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 RHBDL3P58872 404 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 GSTO1P78417 241 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 NAA16Q6N069 864 aaPredicted RBP19.81■□□□□ 0.76
SKP2-205ENST00000509692 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 BEGAINQ9BUH8 593 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 RFX7Q2KHR2 1363 aa19.81■□□□□ 0.76
SKP2-205ENST00000509692 RPAP1Q9BWH6 1393 aaPredicted RBP19.81■□□□□ 0.76
SKP2-205ENST00000509692 TRIM6-TRIM34B2RNG4 842 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 HSPA8P11142 646 aaKnown RBP19.8■□□□□ 0.76
SKP2-205ENST00000509692 CTCFP49711 727 aaPredicted RBP19.8■□□□□ 0.76
SKP2-205ENST00000509692 COL13A1Q5TAT6 717 aaPredicted RBP19.8■□□□□ 0.76
SKP2-205ENST00000509692 MAGEB6Q8N7X4 407 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 EVI5LQ96CN4 794 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 SLC10A4Q96EP9 437 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
SKP2-205ENST00000509692 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
SKP2-205ENST00000509692 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 UNCXA6NJT0 531 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 LBX1P52954 281 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 SLC9C2Q5TAH2 1124 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.8■□□□□ 0.76
SKP2-205ENST00000509692 ADGRA1Q86SQ6 560 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 ANKRD13AQ8IZ07 590 aa19.8■□□□□ 0.76
SKP2-205ENST00000509692 GSPT1P15170 499 aaKnown RBP19.79■□□□□ 0.76
SKP2-205ENST00000509692 SPRYD7Q5W111 196 aa19.79■□□□□ 0.76
SKP2-205ENST00000509692 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
SKP2-205ENST00000509692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
SKP2-205ENST00000509692 RILPL2Q969X0 211 aa19.79■□□□□ 0.76
SKP2-205ENST00000509692 FSD1Q9BTV5 496 aa19.79■□□□□ 0.76
SKP2-205ENST00000509692 ENTPD3O75355 529 aa19.78■□□□□ 0.76
SKP2-205ENST00000509692 PDE6AP16499 860 aa19.78■□□□□ 0.76
SKP2-205ENST00000509692 CYP7A1P22680 504 aa19.78■□□□□ 0.76
SKP2-205ENST00000509692 ZSCAN25Q6NSZ9 544 aa19.78■□□□□ 0.76
SKP2-205ENST00000509692 TMED8Q6PL24 325 aaPredicted RBP19.78■□□□□ 0.76
SKP2-205ENST00000509692 SH3BP5LQ7L8J4 393 aa19.78■□□□□ 0.76
SKP2-205ENST00000509692 MAP3K9P80192 1104 aa19.77■□□□□ 0.76
SKP2-205ENST00000509692 PICALMQ13492 652 aa19.77■□□□□ 0.76
SKP2-205ENST00000509692 WNK4Q96J92 1243 aa19.77■□□□□ 0.76
SKP2-205ENST00000509692 AATFQ9NY61 560 aaKnown RBP eCLIP19.77■□□□□ 0.76
SKP2-205ENST00000509692 ZNF532Q9HCE3 1301 aa19.77■□□□□ 0.75
SKP2-205ENST00000509692 ADD2P35612 726 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 GJA5P36382 358 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 VGLL4Q14135 290 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 LRRFIP1Q32MZ4 808 aaKnown RBP19.76■□□□□ 0.75
SKP2-205ENST00000509692 SH3RF3Q8TEJ3 882 aaPredicted RBP19.76■□□□□ 0.75
SKP2-205ENST00000509692 HOOK2Q96ED9 719 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 TCRBV5S4A2TA0A5A2 114 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 DDTLA6NHG4 134 aaPredicted RBP19.76■□□□□ 0.75
SKP2-205ENST00000509692 CA12O43570 354 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 REM2Q8IYK8 340 aaPredicted RBP19.76■□□□□ 0.75
SKP2-205ENST00000509692 PRDM10Q9NQV6 1147 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 RNF186Q9NXI6 227 aa19.76■□□□□ 0.75
SKP2-205ENST00000509692 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 CDK5RAP2Q96SN8 1893 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 RNF113AO15541 343 aaKnown RBP19.75■□□□□ 0.75
SKP2-205ENST00000509692 CHGBP05060 677 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 ZFYP08048 801 aaPredicted RBP19.75■□□□□ 0.75
SKP2-205ENST00000509692 SDSP20132 328 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 TM4SF4P48230 202 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 PPP4CP60510 307 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 UBE3CQ15386 1083 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 SLFNL1Q499Z3 407 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 DCAF15Q66K64 600 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 ZKSCAN4Q969J2 545 aaPredicted RBP19.75■□□□□ 0.75
SKP2-205ENST00000509692 WRNIP1Q96S55 665 aa19.75■□□□□ 0.75
SKP2-205ENST00000509692 NOL10Q9BSC4 688 aaKnown RBP19.75■□□□□ 0.75
SKP2-205ENST00000509692 NPM3O75607 178 aaKnown RBP19.74■□□□□ 0.75
SKP2-205ENST00000509692 TRPA1O75762 1119 aa19.74■□□□□ 0.75
SKP2-205ENST00000509692 SLURP2P0DP57 97 aa19.74■□□□□ 0.75
SKP2-205ENST00000509692 ZBTB48P10074 688 aaPredicted RBP19.74■□□□□ 0.75
SKP2-205ENST00000509692 TEX11Q8IYF3 940 aa19.74■□□□□ 0.75
SKP2-205ENST00000509692 ZNF341Q9BYN7 854 aa19.74■□□□□ 0.75
SKP2-205ENST00000509692 LAMB1P07942 1786 aa19.74■□□□□ 0.75
SKP2-205ENST00000509692 CASP8AP2Q9UKL3 1982 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 BAG3O95817 575 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
SKP2-205ENST00000509692 OPTNQ96CV9 577 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 ZNF112Q9UJU3 913 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 CSADQ9Y600 493 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 SNCAIPQ9Y6H5 919 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 INPP5BP32019 993 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 DYNLL1P63167 89 aaKnown RBP19.73■□□□□ 0.75
SKP2-205ENST00000509692 TICAM2Q86XR7 235 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 MIGA1Q8NAN2 632 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
SKP2-205ENST00000509692 BMP2KLQ5H9B9 411 aa19.72■□□□□ 0.75
SKP2-205ENST00000509692 OSBPL5Q9H0X9 879 aaPredicted RBP19.72■□□□□ 0.75
SKP2-205ENST00000509692 FOCADQ5VW36 1801 aa19.72■□□□□ 0.75
SKP2-205ENST00000509692 MAP3K10Q02779 954 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms