RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NFIAQ12857 509 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 PICALMQ13492 652 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 VGLL4Q14135 290 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 ZNF341Q9BYN7 854 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 LNPKQ9C0E8 428 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 SIPA1L1O43166 1804 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 MROH7-TTC4A0A0A0MT08 1334 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 RGS3P49796 1198 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 NUCB1Q02818 461 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 ADGRA1Q86SQ6 560 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 ABHD8Q96I13 439 aa10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 DDX60LQ5H9U9 1706 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-213ENST00000509357 GAKO14976 1311 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 AK9Q5TCS8 1911 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 CCDC85CA6NKD9 419 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 ENTPD3O75355 529 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 IFNL1Q8IU54 200 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 CNKSR2Q8WXI2 1034 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 NSUN4Q96CB9 384 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 GCC1Q96CN9 775 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 MCOLN1Q9GZU1 580 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 BOLA2Q9H3K6 86 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 RWDD1Q9H446 243 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 FAM198AQ9UFP1 575 aa10.65□□□□□ -0.7
PDLIM5-213ENST00000509357 GPR75-ASB3A0A0A6YYF3 556 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 CCL15-CCL14A0A0B4J2E2 113 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 GPR25O00155 361 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 WDHD1O75717 1129 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 BAG3O95817 575 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 ATP5JP18859 108 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 GJA5P36382 358 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 GTF2A2P52657 109 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 CCL15Q16663 113 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 ERO1BQ86YB8 467 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 PLEKHM2Q8IWE5 1019 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 ZFPM1Q8IX07 1006 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 ZNF296Q8WUU4 475 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 IDI2Q9BXS1 227 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-213ENST00000509357 IGF2BP3O00425 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 FKTNO75072 461 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 IDH1O75874 414 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 MAP4K4O95819 1239 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 INPP5BP32019 993 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 CTU1Q7Z7A3 348 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 HAUS7Q99871 368 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 SNCAIPQ9Y6H5 919 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 OTOFQ9HC10 1997 aa10.63□□□□□ -0.71
PDLIM5-213ENST00000509357 TCRBV5S4A2TA0A5A2 114 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 CETPP11597 493 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 PLCG2P16885 1265 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 MX1P20591 662 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 PDE1AP54750 535 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 SNAPC2Q13487 334 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 PICK1Q9NRD5 415 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 AATFQ9NY61 560 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDLIM5-213ENST00000509357 DDTLA6NHG4 134 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 GOLIM4O00461 696 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 IRF6O14896 467 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 CYP7A1P22680 504 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 RHBDL3P58872 404 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 PPATQ06203 517 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 CRHR2Q13324 411 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 PPIL2Q13356 520 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 TAF1CQ15572 869 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 SH3RF3Q8TEJ3 882 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 BRI3BPQ8WY22 251 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 DNAJC2Q99543 621 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 PTPN18Q99952 460 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 TRIM34Q9BYJ4 488 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 ZFYVE28Q9HCC9 887 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 DDX4Q9NQI0 724 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
PDLIM5-213ENST00000509357 NAV1Q8NEY1 1877 aa10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 EVX2Q03828 476 aa10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 SH3BP5LQ7L8J4 393 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms