RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
COPS4-206ENST00000509093 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 CYP21A2P08686 494 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 TCEANC2Q96MN5 208 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 GPAA1O43292 621 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 LRRFIP1Q32MZ4 808 aaKnown RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 VPS37DQ86XT2 251 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.99□□□□□ -0.33
COPS4-206ENST00000509093 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
COPS4-206ENST00000509093 ANKRD31Q8N7Z5 1873 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 SKILP12757 684 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 HNRNPH2P55795 449 aaKnown RBP12.98□□□□□ -0.33
COPS4-206ENST00000509093 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 UBE3CQ15386 1083 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 DNAJC25Q9H1X3 360 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 FEZ2Q9UHY8 353 aaPredicted RBP12.98□□□□□ -0.33
COPS4-206ENST00000509093 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
COPS4-206ENST00000509093 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
COPS4-206ENST00000509093 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 CCAR2Q8N163 923 aaKnown RBP12.97□□□□□ -0.33
COPS4-206ENST00000509093 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 PDCP20941 246 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 CCZ1BP86790 482 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 CCZ1P86791 482 aaPredicted RBP12.97□□□□□ -0.33
COPS4-206ENST00000509093 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 L2HGDHQ9H9P8 463 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 GNL3LQ9NVN8 582 aaKnown RBP12.97□□□□□ -0.33
COPS4-206ENST00000509093 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 ABCF2Q9UG63 623 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 MYH7P12883 1935 aa12.97□□□□□ -0.33
COPS4-206ENST00000509093 GOLGA6L19H0YKK7 550 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 SRGNP10124 158 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 MAP3K12Q12852 859 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 LARP1BQ659C4 914 aaKnown RBP12.96□□□□□ -0.33
COPS4-206ENST00000509093 CDC37L1Q7L3B6 337 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 XDHP47989 1333 aa12.96□□□□□ -0.33
COPS4-206ENST00000509093 CCDC69A6NI79 296 aa12.96□□□□□ -0.34
COPS4-206ENST00000509093 DTNBO60941 627 aa12.96□□□□□ -0.34
COPS4-206ENST00000509093 BBOX1O75936 387 aa12.96□□□□□ -0.34
COPS4-206ENST00000509093 BAG6P46379 1132 aa12.96□□□□□ -0.34
COPS4-206ENST00000509093 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.34
COPS4-206ENST00000509093 SPATA32Q96LK8 384 aa12.96□□□□□ -0.34
COPS4-206ENST00000509093 FGAP02671 866 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 PNMA6AP0CW24 399 aaPredicted RBP12.95□□□□□ -0.34
COPS4-206ENST00000509093 HAND2P61296 217 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 IQCB1Q15051 598 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
COPS4-206ENST00000509093 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 STRBPQ96SI9 672 aaKnown RBP12.95□□□□□ -0.34
COPS4-206ENST00000509093 ARMT1Q9H993 441 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 LEMD3Q9Y2U8 911 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 UFL1O94874 794 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 MBD4O95243 580 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 CLCN6P51797 869 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 ME3Q16798 604 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 MIGA1Q8NAN2 632 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
COPS4-206ENST00000509093 PPEF1O14829 653 aaPredicted RBP12.94□□□□□ -0.34
COPS4-206ENST00000509093 PRKAB2O43741 272 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 PSMA5P28066 241 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 PLA2G4AP47712 749 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 TPM4P67936 248 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 LCORLQ8N3X6 602 aa12.94□□□□□ -0.34
COPS4-206ENST00000509093 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
COPS4-206ENST00000509093 NR1I2O75469 434 aa12.93□□□□□ -0.34
COPS4-206ENST00000509093 NPR1P16066 1061 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms