RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ORC4O43929 436 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 IARSP41252 1262 aaKnown RBP10.76□□□□□ -0.69
HTT-205ENST00000509043 TRIM29Q14134 588 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 CCDC178Q5BJE1 867 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 RBM43Q6ZSC3 357 aaKnown RBP10.76□□□□□ -0.69
HTT-205ENST00000509043 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 TRIM22Q8IYM9 498 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 MIGA1Q8NAN2 632 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 TDRD7Q8NHU6 1098 aaKnown RBP10.76□□□□□ -0.69
HTT-205ENST00000509043 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 ANKIB1Q9P2G1 1089 aa10.76□□□□□ -0.69
HTT-205ENST00000509043 PRKAB2O43741 272 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 BAG3O95817 575 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 SERPINB2P05120 415 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 MECOMQ03112 1051 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 SSRP1Q08945 709 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 AMIGO3Q86WK7 504 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 DZIP1Q86YF9 867 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 JMYQ8N9B5 988 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 ALG1Q9BT22 464 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 FUCA2Q9BTY2 467 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 TNMDQ9H2S6 317 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 TFIP11Q9UBB9 837 aaKnown RBP10.75□□□□□ -0.69
HTT-205ENST00000509043 CHD4Q14839 1912 aa10.75□□□□□ -0.69
HTT-205ENST00000509043 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 MYH15Q9Y2K3 1946 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 LDHBP07195 334 aaKnown RBP10.74□□□□□ -0.69
HTT-205ENST00000509043 PPP4CP60510 307 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
HTT-205ENST00000509043 PDE4BQ07343 736 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 SAFBQ15424 915 aaKnown RBP eCLIP10.74□□□□□ -0.69
HTT-205ENST00000509043 NTRK3Q16288 839 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 RTN1Q16799 776 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 ADALQ6DHV7 355 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 ADGRA1Q86SQ6 560 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 NLGN1Q8N2Q7 840 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 TBC1D22AQ8WUA7 517 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 DACT1Q9NYF0 836 aa10.74□□□□□ -0.69
HTT-205ENST00000509043 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
HTT-205ENST00000509043 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 DDAH1O94760 285 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 DEXIO95424 95 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 IL1R1P14778 569 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 PLCG2P16885 1265 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 XBP1P17861 261 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
HTT-205ENST00000509043 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 SEC23AQ15436 765 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 TXNRD1Q16881 649 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 CTR9Q6PD62 1173 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 FANCBQ8NB91 859 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
HTT-205ENST00000509043 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
HTT-205ENST00000509043 ZNF287Q9HBT7 754 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 TOMM22Q9NS69 142 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 CCDC39Q9UFE4 941 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 GGA1Q9UJY5 639 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
HTT-205ENST00000509043 SUGT1Q9Y2Z0 365 aa10.73□□□□□ -0.69
HTT-205ENST00000509043 MORC2Q9Y6X9 1032 aaPredicted RBP10.73□□□□□ -0.69
HTT-205ENST00000509043 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 ESPNB1AK53 854 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 POLRMTO00411 1230 aaKnown RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 KINO60870 393 aaKnown RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 LIG1P18858 919 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 CDC27P30260 824 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 ME1P48163 572 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 CHAF1AQ13111 956 aaPredicted RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 GNL2Q13823 731 aaKnown RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 STK38Q15208 465 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 SF3A1Q15459 793 aaKnown RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 KRT40Q6A162 431 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 SASS6Q6UVJ0 657 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 SMIM5Q71RC9 77 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 SP8Q8IXZ3 490 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 ZNF654Q8IZM8 581 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 FAM177A1Q8N128 213 aaPredicted RBP10.72□□□□□ -0.69
HTT-205ENST00000509043 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
HTT-205ENST00000509043 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms