RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
UBE2D3-228ENST00000508974 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
UBE2D3-228ENST00000508974 CDK5RAP2Q96SN8 1893 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 CCL15-CCL14A0A0B4J2E2 113 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 SPDYE5A6NIY4 337 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 SLURP2P0DP57 97 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 GSTO1P78417 241 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 CCL15Q16663 113 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 MS4A4AQ96JQ5 239 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 IDI2Q9BXS1 227 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
UBE2D3-228ENST00000508974 GPR75-ASB3A0A0A6YYF3 556 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 FKTNO75072 461 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 ENTPD3O75355 529 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 WDHD1O75717 1129 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 ZAP70P43403 619 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 CRHR2Q13324 411 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 OTUD7BQ6GQQ9 843 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 AACSQ86V21 672 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 BRI3BPQ8WY22 251 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 FAM163AQ96GL9 167 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 NDUFB9Q9Y6M9 179 aa18.15■□□□□ 0.5
UBE2D3-228ENST00000508974 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 IRF6O14896 467 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 CYP2E1P05181 493 aaPredicted RBP18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 LDHCP07864 332 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 GTF2A2P52657 109 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 RHBDL3P58872 404 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 CFHR5Q9BXR6 569 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 ZBTB40Q9NUA8 1239 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
UBE2D3-228ENST00000508974 TESPA1A2RU30 521 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 NAA16Q6N069 864 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 SH3RF3Q8TEJ3 882 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 NOL10Q9BSC4 688 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 PIH1D3Q9NQM4 214 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
UBE2D3-228ENST00000508974 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 PPIL2Q13356 520 aa18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 TAF1CQ15572 869 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 TEX11Q8IYF3 940 aa18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
UBE2D3-228ENST00000508974 AATFQ9NY61 560 aaKnown RBP eCLIP18.12■□□□□ 0.496e-12■■□□□ 12.2
UBE2D3-228ENST00000508974 FAM196BA6NMK8 535 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 HMMRO75330 724 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 SNAPC2Q13487 334 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 HSP90AB4PQ58FF6 505 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 ADGRA1Q86SQ6 560 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 ZNF112Q9UJU3 913 aa18.11■□□□□ 0.49
UBE2D3-228ENST00000508974 ZSWIM8A7E2V4 1837 aa18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 IDH1O75874 414 aaKnown RBP18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 CETPP11597 493 aa18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 PPATQ06203 517 aa18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.1■□□□□ 0.49
UBE2D3-228ENST00000508974 SIPA1L1O43166 1804 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 PHIPQ8WWQ0 1821 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 BTBD19C9JJ37 291 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 OSBPL5Q9H0X9 879 aaPredicted RBP18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 ANTXR1Q9H6X2 564 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 TRIM17Q9Y577 477 aa18.09■□□□□ 0.49
UBE2D3-228ENST00000508974 PHF20L1A8MW92 1017 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 SOX10P56693 466 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 NOL9Q5SY16 702 aaKnown RBP18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 KIF1BPQ96EK5 621 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 ZFYVE28Q9HCC9 887 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 PICK1Q9NRD5 415 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 PTPRFP10586 1907 aa18.08■□□□□ 0.48
UBE2D3-228ENST00000508974 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 BAG3O95817 575 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 CYP7A1P22680 504 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 DYNLL1P63167 89 aaKnown RBP18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 SLC4A8Q2Y0W8 1093 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 CCDC84Q86UT8 332 aaPredicted RBP18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 SCYL3Q8IZE3 742 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 TGFBRAP1Q8WUH2 860 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 MYH1P12882 1939 aa18.07■□□□□ 0.48
UBE2D3-228ENST00000508974 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 SP3Q02447 781 aa18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 PKN2Q16513 984 aaKnown RBP18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 OTOP1Q7RTM1 612 aa18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 MAGEB6Q8N7X4 407 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms