RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ZNF428Q96B54 188 aa11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 GPSM3Q9Y4H4 160 aa11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZNF280AP59817 542 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 LAS1LQ9Y4W2 734 aaKnown RBP11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZNF609O15014 1411 aa11.16□□□□□ -0.62
COL4A3BP-206ENST00000508809 PSME4Q14997 1843 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 ADM5C9JUS6 153 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZNF853P0CG23 659 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 HSP90B1P14625 803 aaKnown RBP11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZNF157P51786 506 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 CRIPAKQ8N1N5 446 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 CSRNP1Q96S65 589 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 GMLQ99445 158 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 RNF186Q9NXI6 227 aa11.15□□□□□ -0.62
COL4A3BP-206ENST00000508809 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 CCDC191Q8NCU4 936 aa11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
COL4A3BP-206ENST00000508809 TRPA1O75762 1119 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 ADH1CP00326 375 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 MBIPQ9NS73 344 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 CDV3Q9UKY7 258 aaKnown RBP11.13□□□□□ -0.63
COL4A3BP-206ENST00000508809 ASTN2O75129 1339 aaPredicted RBP11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 PDE8AO60658 829 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 UFL1O94874 794 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 FKBP1BP68106 108 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 SCARF1Q14162 830 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 CCDC152Q4G0S7 254 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 HPS1Q92902 700 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 CDCA5Q96FF9 252 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 C1QTNF2Q9BXJ5 285 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
COL4A3BP-206ENST00000508809 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 NR5A1Q13285 461 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 NNTQ13423 1086 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 VASH1Q7L8A9 365 aaPredicted RBP11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 RASAL3Q86YV0 1011 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 EPS8L1Q8TE68 723 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 MAP4K5Q9Y4K4 846 aa11.11□□□□□ -0.63
COL4A3BP-206ENST00000508809 XDHP47989 1333 aa11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 LCE2BO14633 110 aa11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 MYD88Q99836 296 aa11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 CWC25Q9NXE8 425 aaPredicted RBP11.1□□□□□ -0.63
COL4A3BP-206ENST00000508809 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 GNAI1P63096 354 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 CHMP4AQ9BY43 222 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 CENPFP49454 3210 aa11.09□□□□□ -0.63
COL4A3BP-206ENST00000508809 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 MYH3P11055 1940 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 TM4SF4P48230 202 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 MMP14P50281 582 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 BSDC1Q9NW68 430 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-206ENST00000508809 MINPP1Q9UNW1 487 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms