RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SCARA3Q6AZY7 606 aa12.01□□□□□ -0.49
CHD1-205ENST00000508756 TRIM42Q8IWZ5 723 aa12.01□□□□□ -0.49
CHD1-205ENST00000508756 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
CHD1-205ENST00000508756 ERMP1Q7Z2K6 904 aa12□□□□□ -0.49
CHD1-205ENST00000508756 RSRP1Q9BUV0 290 aa12□□□□□ -0.49
CHD1-205ENST00000508756 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
CHD1-205ENST00000508756 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
CHD1-205ENST00000508756 ITGB7P26010 798 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 GBP2P32456 591 aaPredicted RBP11.99□□□□□ -0.49
CHD1-205ENST00000508756 CDK8P49336 464 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 INPP5AQ14642 412 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 CLEC10AQ8IUN9 316 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 TMEM74Q96NL1 305 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 MIR1-1HGQ9H1L0 117 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 ACSS3Q9H6R3 686 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
CHD1-205ENST00000508756 NFICP08651 508 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 LRFN4Q6PJG9 635 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 HS2ST1Q7LGA3 356 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 C12orf40Q86WS4 652 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 RHOVQ96L33 236 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 FAM83CQ9BQN1 747 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 SEMA6CQ9H3T2 930 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 PIDD1Q9HB75 910 aa11.98□□□□□ -0.49
CHD1-205ENST00000508756 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.97□□□□□ -0.49
CHD1-205ENST00000508756 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 MINDY4BA8MYZ0 360 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 PF4P02776 101 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
CHD1-205ENST00000508756 ERVK-24P63145 666 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 PPM1JQ5JR12 505 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 EZH1Q92800 747 aaPredicted RBP11.97□□□□□ -0.49
CHD1-205ENST00000508756 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
CHD1-205ENST00000508756 PLPPR2Q96GM1 343 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
CHD1-205ENST00000508756 ADAM23O75077 832 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 NEFMP07197 916 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 FSTP19883 344 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 ZNF76P36508 570 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 FANCCQ00597 558 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 CAMK2GQ13555 558 aaPredicted RBP11.96□□□□□ -0.49
CHD1-205ENST00000508756 NFKBIBQ15653 356 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 PRSS36Q5K4E3 855 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
CHD1-205ENST00000508756 LMNB2Q03252 620 aa11.95□□□□□ -0.5
CHD1-205ENST00000508756 PWP1Q13610 501 aa11.95□□□□□ -0.5
CHD1-205ENST00000508756 WIPI1Q5MNZ9 446 aaPredicted RBP11.95□□□□□ -0.5
CHD1-205ENST00000508756 BNC2Q6ZN30 1099 aaPredicted RBP11.95□□□□□ -0.5
CHD1-205ENST00000508756 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
CHD1-205ENST00000508756 DYNC1LI2O43237 492 aaPredicted RBP11.94□□□□□ -0.5
CHD1-205ENST00000508756 RNGTTO60942 597 aaKnown RBP11.94□□□□□ -0.5
CHD1-205ENST00000508756 RBM25P49756 843 aaKnown RBP11.94□□□□□ -0.5
CHD1-205ENST00000508756 PAOXQ6QHF9 649 aa11.94□□□□□ -0.5
CHD1-205ENST00000508756 NTF4P34130 210 aa11.93□□□□□ -0.5
CHD1-205ENST00000508756 RING1Q06587 406 aa11.93□□□□□ -0.5
CHD1-205ENST00000508756 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CHD1-205ENST00000508756 RNF214Q8ND24 703 aa11.93□□□□□ -0.5
CHD1-205ENST00000508756 ISL2Q96A47 359 aa11.93□□□□□ -0.5
CHD1-205ENST00000508756 PICK1Q9NRD5 415 aa11.93□□□□□ -0.5
CHD1-205ENST00000508756 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
CHD1-205ENST00000508756 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
CHD1-205ENST00000508756 SCAMP3O14828 347 aaKnown RBP11.92□□□□□ -0.5
CHD1-205ENST00000508756 NFIAQ12857 509 aa11.92□□□□□ -0.5
CHD1-205ENST00000508756 MAP7Q14244 749 aa11.92□□□□□ -0.5
CHD1-205ENST00000508756 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
CHD1-205ENST00000508756 HDXQ7Z353 690 aa11.92□□□□□ -0.5
CHD1-205ENST00000508756 F13A1P00488 732 aa11.91□□□□□ -0.5
CHD1-205ENST00000508756 GARTP22102 1010 aa11.91□□□□□ -0.5
CHD1-205ENST00000508756 SNAP47Q5SQN1 464 aa11.91□□□□□ -0.5
CHD1-205ENST00000508756 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
CHD1-205ENST00000508756 IGLV1-40P01703 118 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 UBE3DQ7Z6J8 389 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 SHISA5Q8N114 240 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 GOLM1Q8NBJ4 401 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 RNF34Q969K3 372 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 MFSD14AQ96MC6 490 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 SNCAIPQ9Y6H5 919 aa11.9□□□□□ -0.5
CHD1-205ENST00000508756 FAM221AA4D161 298 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 GFRA2O00451 464 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 SEZ6L2Q6UXD5 910 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 CCDC84Q86UT8 332 aaPredicted RBP11.89□□□□□ -0.51
CHD1-205ENST00000508756 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 SSU72Q9NP77 194 aaKnown RBP11.89□□□□□ -0.51
CHD1-205ENST00000508756 ADAMTS1Q9UHI8 967 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 PCDHGB7Q9Y5F8 929 aa11.89□□□□□ -0.51
CHD1-205ENST00000508756 FANCGO15287 622 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 ADMP35318 185 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
CHD1-205ENST00000508756 RPL6Q02878 288 aaKnown RBP11.88□□□□□ -0.51
CHD1-205ENST00000508756 ZNF394Q53GI3 561 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 FBXL19Q6PCT2 694 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 FBXL6Q8N531 539 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 GATAD2BQ8WXI9 593 aa11.88□□□□□ -0.51
CHD1-205ENST00000508756 C1GALT1Q9NS00 363 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms