RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CARMIL2Q6F5E8 1435 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 H3BRB1 525 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 ECM1Q16610 540 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 ARHGAP27Q6ZUM4 889 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 WFDC3Q8IUB2 231 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 SMYD4Q8IYR2 804 aaPredicted RBP6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 PI4K2BQ8TCG2 481 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 TMC1Q8TDI8 760 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 CCDC74AQ96AQ1 378 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 NIF3L1Q9GZT8 377 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 ATXN3LQ9H3M9 355 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 TUT1Q9H6E5 874 aaKnown RBP6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 RC3H2Q9HBD1 1191 aaKnown RBP6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 DISC1Q9NRI5 854 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 VAV3Q9UKW4 847 aa6.19□□□□□ -1.42
SMARCA5-202ENST00000508573 NDUFB5O43674 189 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 ZNF862O60290 1169 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 FUT4P22083 530 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 CD96P40200 585 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 SERPINB4P48594 390 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 ID3Q02535 119 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 PTPN12Q05209 780 aaKnown RBP6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 FAAP100Q0VG06 881 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 PDE3BQ13370 1112 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 TMED8Q6PL24 325 aaPredicted RBP6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 TXNDC2Q86VQ3 553 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 KCNB2Q92953 911 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 MRRFQ96E11 262 aaKnown RBP6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 ABCB6Q9NP58 842 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 SSU72Q9NP77 194 aaKnown RBP6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 EGFL7Q9UHF1 273 aa6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
SMARCA5-202ENST00000508573 LEFTY1O75610 366 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 FARP2O94887 1054 aaPredicted RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 RNASE1P07998 156 aaKnown RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 HCLS1P14317 486 aaPredicted RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 TTLL4Q14679 1199 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 AOC3Q16853 763 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 RPS26P11Q5JNZ5 115 aaPredicted RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 ATG4DQ86TL0 474 aaPredicted RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 TICAM2Q86XR7 235 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 ANKRD13AQ8IZ07 590 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 PSMD1Q99460 953 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 MBNL3Q9NUK0 354 aaKnown RBP6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 PCOLCE2Q9UKZ9 415 aa6.17□□□□□ -1.42
SMARCA5-202ENST00000508573 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 GSTP1P09211 210 aaKnown RBP6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 PRKCQQ04759 706 aa6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 GLIS3Q8NEA6 775 aa6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 FAM168AQ92567 244 aa6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 PPP4R2Q9NY27 417 aa6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
SMARCA5-202ENST00000508573 ARHGAP4P98171 946 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 KIF4BQ2VIQ3 1234 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 DTHD1Q6ZMT9 781 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 EPS8L3Q8TE67 593 aaKnown RBP6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 FAM129BQ96TA1 746 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 DNAJC25Q9H1X3 360 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 ADAMTS6Q9UKP5 1117 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 U3KQE9 123 aa6.15□□□□□ -1.42
SMARCA5-202ENST00000508573 DBX1A6NMT0 343 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 OXCT1P55809 520 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 FCGRTP55899 365 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 PPP2R3AQ06190 1150 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 GRM2Q14416 872 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 IFI16Q16666 785 aaKnown RBP6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 PRPF40BQ6NWY9 871 aaKnown RBP6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 KSR1Q8IVT5 923 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 LRRN4CLQ8ND94 238 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 HRASLS5Q96KN8 279 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 CITED4Q96RK1 184 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 BCCIPQ9P287 314 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 PLAGL2Q9UPG8 496 aa6.14□□□□□ -1.43
SMARCA5-202ENST00000508573 TMEM265A0A087WTH1 108 aa6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 PKN1Q16512 942 aa6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 B4GALNT3Q6L9W6 998 aa6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 TMEM40Q8WWA1 233 aa6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 TMEM39AQ9NV64 488 aa6.13□□□□□ -1.43
SMARCA5-202ENST00000508573 CLSTN1O94985 981 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 CEACAM5P06731 702 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 TCF3P15923 654 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 NCLP19338 710 aaKnown RBP6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 ITIH2P19823 946 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 TOP6BLQ8N6T0 577 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 ISL2Q96A47 359 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 CSRNP1Q96S65 589 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 SLC38A3Q99624 504 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 PCDHGC5Q9Y5F6 944 aa6.12□□□□□ -1.43
SMARCA5-202ENST00000508573 ANKRD62A6NC57 917 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms