RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
BRCC3P1-201ENST00000508559 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 RRAGCQ9HB90 399 aa13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 FLT1P17948 1338 aa13.12□□□□□ -0.31
BRCC3P1-201ENST00000508559 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 USP17L21D6R901 530 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 ENTPD3O75355 529 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 WDHD1O75717 1129 aaPredicted RBP13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 EGFRP00533 1210 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 HAND2P61296 217 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 FKBP1CQ5VVH2 108 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 TTC6Q86TZ1 520 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 TOMM22Q9NS69 142 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 GGA3Q9NZ52 723 aa13.11□□□□□ -0.31
BRCC3P1-201ENST00000508559 ADAMTSL1Q8N6G6 1762 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 NFIAQ12857 509 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 TRDNQ13061 729 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 OSBPL5Q9H0X9 879 aaPredicted RBP13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 ZMYM6O95789 1325 aa13.1□□□□□ -0.31
BRCC3P1-201ENST00000508559 SLC27A2O14975 620 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 PPARAQ07869 468 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 KRT32Q14532 448 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 FAM198AQ9UFP1 575 aa13.09□□□□□ -0.31
BRCC3P1-201ENST00000508559 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 FOXP2O15409 715 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 CYP2D6P10635 497 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 HSPA4P34932 840 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 PDE4BQ07343 736 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 RASA3Q14644 834 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 HOOK2Q96ED9 719 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.32
BRCC3P1-201ENST00000508559 PSMA5P28066 241 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 KRT26Q7Z3Y9 468 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 ZFPM1Q8IX07 1006 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 PI4KBQ9UBF8 816 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 SCAF8Q9UPN6 1271 aaKnown RBP13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
BRCC3P1-201ENST00000508559 CYP21A2P08686 494 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 ANAPC15P60006 121 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 JAKMIP1Q96N16 626 aaKnown RBP13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 SERPINB13Q9UIV8 391 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
BRCC3P1-201ENST00000508559 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 SCN4AP35499 1836 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 POTECB2RU33 542 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 E7EWF7 191 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 NF2P35240 595 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms