RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FAM181AQ8N9Y4 354 aa7.35□□□□□ -1.23
PDLIM5-211ENST00000508531 AGBL5Q8NDL9 886 aa7.35□□□□□ -1.23
PDLIM5-211ENST00000508531 BCL7CQ8WUZ0 217 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-211ENST00000508531 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
PDLIM5-211ENST00000508531 NEFMP07197 916 aa7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 NME2P22392 152 aa7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 ARNTP27540 789 aa7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 PLD6Q8N2A8 252 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
PDLIM5-211ENST00000508531 LEFTY1O75610 366 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 MAPK8P45983 427 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 BNIP3Q12983 259 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 TPTE2Q6XPS3 522 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 SPRED2Q7Z698 418 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 GPBAR1Q8TDU6 330 aa7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 SSU72Q9NP77 194 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-211ENST00000508531 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 MPRIPQ6WCQ1 1025 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 C3orf58Q8NDZ4 430 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 ISL2Q96A47 359 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 SETDB2Q96T68 719 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 EMILIN2Q9BXX0 1053 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 U3KQE9 123 aa7.32□□□□□ -1.24
PDLIM5-211ENST00000508531 YBX3P16989 372 aaKnown RBP eCLIP7.31□□□□□ -1.246e-8■□□□□ 8.3
PDLIM5-211ENST00000508531 ZNF252P-AS1Q0IIN9 211 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 STK11IPQ8N1F8 1099 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 NETO1Q8TDF5 533 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 DUSP23Q9BVJ7 150 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 CSADQ9Y600 493 aa7.31□□□□□ -1.24
PDLIM5-211ENST00000508531 FBXO24O75426 580 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 ITGB5P18084 799 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 GSTT1P30711 240 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 ERVK-24P63145 666 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 ARHGAP27Q6ZUM4 889 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 GRIN3AQ8TCU5 1115 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 ASIC4Q96FT7 647 aa7.3□□□□□ -1.24
PDLIM5-211ENST00000508531 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 ENC1O14682 589 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 PAGE1O75459 146 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 FMR1Q06787 632 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 ZNF792Q3KQV3 632 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 KRTAP9-9Q9BYP9 154 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 OSBPL7Q9BZF2 842 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 WWC3Q9ULE0 1092 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
PDLIM5-211ENST00000508531 CD8BP10966 210 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 BMP6P22004 513 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 CD96P40200 585 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 PPM1JQ5JR12 505 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 ZSCAN29Q8IWY8 852 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 CACNA2D2Q9NY47 1150 aa7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 EIF4G1Q04637 1599 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-211ENST00000508531 DCDC2CA8MYV0 355 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 OXCT1P55809 520 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 OGFOD2Q6N063 350 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 CEP44Q9C0F1 390 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 SRCIN1Q9C0H9 1055 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 SAMM50Q9Y512 469 aa7.27□□□□□ -1.25
PDLIM5-211ENST00000508531 TRIM37O94972 964 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 PAPLNO95428 1278 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 CEACAM5P06731 702 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 ITIH2P19823 946 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 PRKCQQ04759 706 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 RASIP1Q5U651 963 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 ALG1LQ6GMV1 187 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 LLGL2Q6P1M3 1020 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 UBE3DQ7Z6J8 389 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 C12orf40Q86WS4 652 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 ASB16Q96NS5 453 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 VAV3Q9UKW4 847 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 PPM1HQ9ULR3 514 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 PLAGL2Q9UPG8 496 aa7.26□□□□□ -1.25
PDLIM5-211ENST00000508531 CUX2O14529 1486 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 FUT4P22083 530 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 NTF4P34130 210 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 AOC3Q16853 763 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 HRASLS5Q96KN8 279 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 MKNK2Q9HBH9 465 aa7.25□□□□□ -1.25
PDLIM5-211ENST00000508531 CELA3AP09093 270 aa7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 ATP2B2Q01814 1243 aa7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 RC3H2Q9HBD1 1191 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 ADAMTS6Q9UKP5 1117 aa7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 PCDHA4Q9UN74 947 aa7.24□□□□□ -1.25
PDLIM5-211ENST00000508531 TMEM265A0A087WTH1 108 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms