RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 BECN1Q14457 450 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 ANKRD1Q15327 319 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 FAM83AQ86UY5 434 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 L3MBTL3Q96JM7 780 aaPredicted RBP17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 DCP1AQ9NPI6 582 aaPredicted RBP17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
HMGCLL1-208ENST00000508459 SLC27A2O14975 620 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 POLR3DP05423 398 aaPredicted RBP17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 APOBEC3FQ8IUX4 373 aaKnown RBP17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 ADARB2Q9NS39 739 aaKnown RBP17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 CYP46A1Q9Y6A2 500 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 FOCADQ5VW36 1801 aa17.09■□□□□ 0.33
HMGCLL1-208ENST00000508459 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.33
HMGCLL1-208ENST00000508459 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 KCNA4P22459 653 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 RHBDL3P58872 404 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
HMGCLL1-208ENST00000508459 FLT1P17948 1338 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZNF541Q9H0D2 1346 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 DYNLL1P63167 89 aaKnown RBP17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 GRIK5Q16478 980 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 EHD4Q9H223 541 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 IL25Q9H293 177 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 SCN4AP35499 1836 aa17.07■□□□□ 0.32
HMGCLL1-208ENST00000508459 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 CYP21A2P08686 494 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 PPARAQ07869 468 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 SDR42E1Q8WUS8 393 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 ESR2Q92731 530 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
HMGCLL1-208ENST00000508459 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 USP17L21D6R901 530 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 MCM5P33992 734 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZBED3Q96IU2 234 aaPredicted RBP17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 OSBPL5Q9H0X9 879 aaPredicted RBP17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 LAMB1P07942 1786 aa17.05■□□□□ 0.32
HMGCLL1-208ENST00000508459 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ERICH2A1L162 156 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 MINDY4BA8MYZ0 360 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 WNT10BO00744 389 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ORC4O43929 436 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 PRELPP51888 382 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 FGD1P98174 961 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZNF70Q9UC06 446 aaPredicted RBP17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 MYH1P12882 1939 aa17.04■□□□□ 0.32
HMGCLL1-208ENST00000508459 E7EWF7 191 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 PRKAB2O43741 272 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 CHGBP05060 677 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 DHX32Q7L7V1 743 aaKnown RBP17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms