RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MAP4P27816 1152 aaKnown RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 EIF4A3P38919 411 aaKnown RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 SOX9P48436 509 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 PCDH1Q08174 1060 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 NFKBIBQ15653 356 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 SPRED3Q2MJR0 410 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 SGO2Q562F6 1265 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 RNF43Q68DV7 783 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 FBXL19Q6PCT2 694 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 DTHD1Q6ZMT9 781 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 SLC51AQ86UW1 340 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 CLEC10AQ8IUN9 316 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 KIAA0825Q8IV33 1275 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 PHC3Q8NDX5 983 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 GIMAP7Q8NHV1 300 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 SHKBP1Q8TBC3 707 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 DDX54Q8TDD1 881 aaKnown RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 ZNF296Q8WUU4 475 aaPredicted RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 FAM46AQ96IP4 442 aaKnown RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 MFSD14AQ96MC6 490 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 NECAB3Q96P71 396 aaPredicted RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 FAM83CQ9BQN1 747 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMN2-208ENST00000508258 NT5C1AQ9BXI3 368 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 RAD18Q9NS91 495 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 ATG3Q9NT62 314 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 AKAP2Q9Y2D5 859 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 HIF3AQ9Y2N7 669 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 LOC100289279A0A1B0GTE1 492 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 FAM95CA0A1B0GW59 222 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 TLDC2A0PJX2 215 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 MINDY4BA8MYZ0 360 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 WDR64B1ANS9 1081 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 FBXO24O75426 580 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 STK10O94804 968 aaKnown RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 CYP11A1P05108 521 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 CELA3AP09093 270 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 RAB6AP20340 208 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 MAOBP27338 520 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 GBP2P32456 591 aaPredicted RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 LIG3P49916 1009 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 RPS26P62854 115 aaKnown RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 LMNB2Q03252 620 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 FAAP100Q0VG06 881 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 COL9A2Q14055 689 aaPredicted RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 PDE3AQ14432 1141 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 POU4F3Q15319 338 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 RPS26P11Q5JNZ5 115 aaPredicted RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 AKAP4Q5JQC9 854 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 EXOSC6Q5RKV6 272 aaKnown RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 PAOXQ6QHF9 649 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 AGMOQ6ZNB7 445 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 FBLIM1Q8WUP2 373 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 PSMG3-AS1Q96PY0 264 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 CORO1BQ9BR76 489 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 YIPF2Q9BWQ6 316 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 OSBPL1AQ9BXW6 950 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 CEP44Q9C0F1 390 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 CLEC4MQ9H2X3 399 aaPredicted RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 ZNF576Q9H609 170 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 PIF1Q9H611 641 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 SOX17Q9H6I2 414 aaPredicted RBP2.8□□□□□ -1.96
SMN2-208ENST00000508258 GINM1Q9NU53 330 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 AP4E1Q9UPM8 1137 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 TLR6Q9Y2C9 796 aa2.8□□□□□ -1.96
SMN2-208ENST00000508258 MEGF11A6BM72 1044 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 F6X3S4 739 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 EIF4EBP3O60516 100 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 PAGE1O75459 146 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 DLGAP3O95886 979 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 PF4P02776 101 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 HSP90B1P14625 803 aaKnown RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 TFE3P19532 575 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 CD97P48960 835 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 ZNF157P51786 506 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 SERINC3Q13530 473 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 CAMK2GQ13555 558 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 MAP3K11Q16584 847 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 HP1BP3Q5SSJ5 553 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 NBPF6Q5VWK0 638 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 TTBK2Q6IQ55 1244 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 INTS5Q6P9B9 1019 aaKnown RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 TPTE2Q6XPS3 522 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 FAM196AQ6ZSG2 479 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 DYMQ7RTS9 669 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 CCDC84Q86UT8 332 aaPredicted RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 ZDHHC13Q8IUH4 622 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 SLITRK4Q8IW52 837 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 SMG8Q8ND04 991 aaKnown RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 PMFBP1Q8TBY8 1022 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 NBPF4Q96M43 638 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 LRRC3Q9BY71 257 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 TMPRSS13Q9BYE2 586 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 OSBPL2Q9H1P3 480 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 LGR6Q9HBX8 967 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 STRIP2Q9ULQ0 834 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 ANGEL1Q9UNK9 670 aaKnown RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 EFR3BQ9Y2G0 817 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 LEMD3Q9Y2U8 911 aa2.79□□□□□ -1.96
SMN2-208ENST00000508258 TBX22Q9Y458 520 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms