RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 DEFB129Q9H1M3 183 aa27.05■■□□□ 1.92
SNCB-204ENST00000508006 GAKO14976 1311 aa27.05■■□□□ 1.92
SNCB-204ENST00000508006 SPDYE2BA6NHP3 402 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 MYO1BO43795 1136 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 ALDH1A1P00352 501 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 SPDYE6P0CI01 402 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 SPRYD7Q5W111 196 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 EDC3Q96F86 508 aaKnown RBP27.04■■□□□ 1.92
SNCB-204ENST00000508006 MROH7-TTC4A0A0A0MT08 1334 aa27.04■■□□□ 1.92
SNCB-204ENST00000508006 PPP1R12BO60237 982 aaPredicted RBP27.03■■□□□ 1.92
SNCB-204ENST00000508006 MAP4K4O95819 1239 aaPredicted RBP27.03■■□□□ 1.92
SNCB-204ENST00000508006 INHBEP58166 350 aa27.03■■□□□ 1.92
SNCB-204ENST00000508006 LDLRAD1Q5T700 205 aa27.03■■□□□ 1.92
SNCB-204ENST00000508006 PRPF38BQ5VTL8 546 aaKnown RBP27.03■■□□□ 1.92
SNCB-204ENST00000508006 CERS3Q8IU89 383 aa27.03■■□□□ 1.92
SNCB-204ENST00000508006 ZNF384Q8TF68 577 aa27.03■■□□□ 1.92
SNCB-204ENST00000508006 ZFYP08048 801 aaPredicted RBP27.02■■□□□ 1.92
SNCB-204ENST00000508006 DIXDC1Q155Q3 683 aa27.02■■□□□ 1.92
SNCB-204ENST00000508006 TTC22Q5TAA0 569 aa27.02■■□□□ 1.92
SNCB-204ENST00000508006 SLC9C2Q5TAH2 1124 aa27.02■■□□□ 1.92
SNCB-204ENST00000508006 FZD1Q9UP38 647 aa27.02■■□□□ 1.92
SNCB-204ENST00000508006 DAGLAQ9Y4D2 1042 aa27.02■■□□□ 1.92
SNCB-204ENST00000508006 RFX7Q2KHR2 1363 aa27.01■■□□□ 1.91
SNCB-204ENST00000508006 GPR75-ASB3A0A0A6YYF3 556 aa27.01■■□□□ 1.91
SNCB-204ENST00000508006 MANSC4A6NHS7 340 aaPredicted RBP27.01■■□□□ 1.91
SNCB-204ENST00000508006 PRMT6Q96LA8 375 aaPredicted RBP27.01■■□□□ 1.91
SNCB-204ENST00000508006 CFHR5Q9BXR6 569 aa27.01■■□□□ 1.91
SNCB-204ENST00000508006 PDE6AP16499 860 aa27■■□□□ 1.91
SNCB-204ENST00000508006 UBE3CQ15386 1083 aa27■■□□□ 1.91
SNCB-204ENST00000508006 APOBEC3HQ6NTF7 200 aaKnown RBP27■■□□□ 1.91
SNCB-204ENST00000508006 MAGEB6Q8N7X4 407 aa27■■□□□ 1.91
SNCB-204ENST00000508006 NOL10Q9BSC4 688 aaKnown RBP27■■□□□ 1.91
SNCB-204ENST00000508006 R3HDMLQ9H3Y0 253 aa27■■□□□ 1.91
SNCB-204ENST00000508006 TRIM6-TRIM34B2RNG4 842 aa26.99■■□□□ 1.91
SNCB-204ENST00000508006 BAG3O95817 575 aa26.99■■□□□ 1.91
SNCB-204ENST00000508006 ADD2P35612 726 aa26.99■■□□□ 1.91
SNCB-204ENST00000508006 SUPT20HL1Q3ZLR7 823 aa26.99■■□□□ 1.91
SNCB-204ENST00000508006 PPP2R3BQ9Y5P8 575 aa26.99■■□□□ 1.91
SNCB-204ENST00000508006 PLCG2P16885 1265 aa26.98■■□□□ 1.91
SNCB-204ENST00000508006 CYP7A1P22680 504 aa26.98■■□□□ 1.91
SNCB-204ENST00000508006 PPP4CP60510 307 aa26.98■■□□□ 1.91
SNCB-204ENST00000508006 FSD1Q9BTV5 496 aa26.98■■□□□ 1.91
SNCB-204ENST00000508006 VEZTQ9HBM0 779 aa26.98■■□□□ 1.91
SNCB-204ENST00000508006 TCRBV5S4A2TA0A5A2 114 aa26.97■■□□□ 1.91
SNCB-204ENST00000508006 CLRN2A0PK11 232 aa26.97■■□□□ 1.91
SNCB-204ENST00000508006 FKBP1CQ5VVH2 108 aa26.97■■□□□ 1.91
SNCB-204ENST00000508006 IFNL1Q8IU54 200 aa26.97■■□□□ 1.91
SNCB-204ENST00000508006 ZNF532Q9HCE3 1301 aa26.96■■□□□ 1.91
SNCB-204ENST00000508006 RNF113AO15541 343 aaKnown RBP26.96■■□□□ 1.91
SNCB-204ENST00000508006 ZBTB48P10074 688 aaPredicted RBP26.96■■□□□ 1.91
SNCB-204ENST00000508006 BTDP43251 543 aa26.96■■□□□ 1.91
SNCB-204ENST00000508006 MAP3K11Q16584 847 aa26.96■■□□□ 1.91
SNCB-204ENST00000508006 SPDYE2Q495Y8 402 aa26.96■■□□□ 1.91
SNCB-204ENST00000508006 PCDHAC2Q9Y5I4 1007 aa26.96■■□□□ 1.91
SNCB-204ENST00000508006 OTUD7BQ6GQQ9 843 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 RILPL2Q969X0 211 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 WNK4Q96J92 1243 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 TDRD3Q9H7E2 651 aaKnown RBP26.95■■□□□ 1.9
SNCB-204ENST00000508006 TMOD2Q9NZR1 351 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 TRIM17Q9Y577 477 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 GTF3C3Q9Y5Q9 886 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 FOCADQ5VW36 1801 aa26.95■■□□□ 1.9
SNCB-204ENST00000508006 GSPT1P15170 499 aaKnown RBP26.94■■□□□ 1.9
SNCB-204ENST00000508006 IREB2P48200 963 aaKnown RBP26.94■■□□□ 1.9
SNCB-204ENST00000508006 TNFAIP1Q13829 316 aa26.94■■□□□ 1.9
SNCB-204ENST00000508006 CLMNQ96JQ2 1002 aa26.94■■□□□ 1.9
SNCB-204ENST00000508006 ZNF70Q9UC06 446 aaPredicted RBP26.94■■□□□ 1.9
SNCB-204ENST00000508006 UNCXA6NJT0 531 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 HIP1O00291 1037 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 BMP2KLQ5H9B9 411 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 CDC42EP5Q6NZY7 148 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 ADGRA1Q86SQ6 560 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 APPBP2Q92624 585 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 USP40Q9NVE5 1235 aa26.93■■□□□ 1.9
SNCB-204ENST00000508006 CDK5RAP2Q96SN8 1893 aa26.92■■□□□ 1.9
SNCB-204ENST00000508006 NPM3O75607 178 aaKnown RBP26.92■■□□□ 1.9
SNCB-204ENST00000508006 RGS3P49796 1198 aa26.92■■□□□ 1.9
SNCB-204ENST00000508006 NBPF12Q5TAG4 269 aaPredicted RBP26.92■■□□□ 1.9
SNCB-204ENST00000508006 MAGEB6P1A0A0J9YX57 407 aa26.91■■□□□ 1.9
SNCB-204ENST00000508006 SDSP20132 328 aa26.91■■□□□ 1.9
SNCB-204ENST00000508006 TNNI2P48788 182 aa26.91■■□□□ 1.9
SNCB-204ENST00000508006 RHBDL3P58872 404 aa26.91■■□□□ 1.9
SNCB-204ENST00000508006 IDI2Q9BXS1 227 aa26.91■■□□□ 1.9
SNCB-204ENST00000508006 AATFQ9NY61 560 aaKnown RBP eCLIP26.91■■□□□ 1.9
SNCB-204ENST00000508006 FAM83AQ86UY5 434 aa26.9■■□□□ 1.9
SNCB-204ENST00000508006 RIOK1Q9BRS2 568 aaKnown RBP26.9■■□□□ 1.9
SNCB-204ENST00000508006 IGF2BP3O00425 579 aaKnown RBP eCLIP26.89■■□□□ 1.9
SNCB-204ENST00000508006 USP2O75604 605 aaPredicted RBP26.89■■□□□ 1.9
SNCB-204ENST00000508006 RASA3Q14644 834 aa26.89■■□□□ 1.9
SNCB-204ENST00000508006 OTOP1Q7RTM1 612 aa26.89■■□□□ 1.9
SNCB-204ENST00000508006 ANKRD13AQ8IZ07 590 aa26.89■■□□□ 1.9
SNCB-204ENST00000508006 ERO1AQ96HE7 468 aa26.89■■□□□ 1.9
SNCB-204ENST00000508006 ZMYM1Q5SVZ6 1142 aa26.88■■□□□ 1.89
SNCB-204ENST00000508006 HELLSQ9NRZ9 838 aa26.88■■□□□ 1.89
SNCB-204ENST00000508006 ENTPD3O75355 529 aa26.87■■□□□ 1.89
SNCB-204ENST00000508006 SKAP1Q86WV1 359 aa26.87■■□□□ 1.89
SNCB-204ENST00000508006 MIGA1Q8NAN2 632 aa26.87■■□□□ 1.89
SNCB-204ENST00000508006 WDHD1O75717 1129 aaPredicted RBP26.86■■□□□ 1.89
SNCB-204ENST00000508006 TEX11Q8IYF3 940 aa26.86■■□□□ 1.89
SNCB-204ENST00000508006 SH3RF3Q8TEJ3 882 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms