RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 TTC5Q8N0Z6 440 aa7.46□□□□□ -1.22
ATXN3-210ENST00000507965 IL17REQ8NFR9 667 aa7.46□□□□□ -1.22
ATXN3-210ENST00000507965 LTBP1Q14766 1721 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 KCNQ3O43525 872 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 TEFQ10587 303 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 ZMYM1Q5SVZ6 1142 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 PRR5LQ6MZQ0 368 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 ZNF790Q6PG37 636 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 TBC1D9Q6ZT07 1266 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 CHSY3Q70JA7 882 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 TTLL6Q8N841 843 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 JMYQ8N9B5 988 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 SMC1BQ8NDV3 1235 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 TBC1D2BQ9UPU7 963 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 PCDHGC4Q9Y5F7 938 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 NPC1L1Q9UHC9 1359 aa7.45□□□□□ -1.22
ATXN3-210ENST00000507965 PRAMEF22A3QJZ6 481 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 GLTPD2A6NH11 291 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 H0YIN7 160 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 C21orf2O43822 256 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 A1BGP04217 495 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 COL13A1Q5TAT6 717 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-210ENST00000507965 ZNF622Q969S3 477 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATXN3-210ENST00000507965 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 CCDC85AQ96PX6 553 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-210ENST00000507965 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
ATXN3-210ENST00000507965 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 COL4A5P29400 1685 aa7.44□□□□□ -1.22
ATXN3-210ENST00000507965 CAMTA2O94983 1202 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 STARD3NLO95772 234 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 ITGB7P26010 798 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 ADH6P28332 368 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 PRKAR2BP31323 418 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 GATA4P43694 442 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 TLR1Q15399 786 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
ATXN3-210ENST00000507965 THSD7BQ9C0I4 1608 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 A0A087WZG4 1122 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-210ENST00000507965 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-210ENST00000507965 VEGFAP15692 232 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-210ENST00000507965 IL6STP40189 918 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-210ENST00000507965 USP4Q13107 963 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
ATXN3-210ENST00000507965 MCM10Q7L590 875 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 NLRP8Q86W28 1048 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 CNBD1Q8NA66 436 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 FMNL2Q96PY5 1086 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 BRIP1Q9BX63 1249 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
ATXN3-210ENST00000507965 TAF1P21675 1872 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 HSPA1AP0DMV8 641 aaKnown RBP7.41□□□□□ -1.22
ATXN3-210ENST00000507965 HSPA1BP0DMV9 641 aaKnown RBP7.41□□□□□ -1.22
ATXN3-210ENST00000507965 PDE6BP35913 854 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 DCTN1Q14203 1278 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 OLFM4Q6UX06 510 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 C1orf216Q8TAB5 229 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 AIDAQ96BJ3 306 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 TAOK3Q9H2K8 898 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 DNAAF2Q9NVR5 837 aaKnown RBP7.41□□□□□ -1.22
ATXN3-210ENST00000507965 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 LTBP3Q9NS15 1303 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 ABCC12Q96J65 1359 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 SNED1Q8TER0 1413 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
ATXN3-210ENST00000507965 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 APBB1O00213 710 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 NPHP1O15259 732 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 DDNO94850 711 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-210ENST00000507965 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
ATXN3-210ENST00000507965 SRGNP10124 158 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 ST5P78524 1137 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 SLC51AQ86UW1 340 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 SETDB2Q96T68 719 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 PLVAPQ9BX97 442 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-210ENST00000507965 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-210ENST00000507965 DOLKQ9UPQ8 538 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 ZNF541Q9H0D2 1346 aa7.4□□□□□ -1.22
ATXN3-210ENST00000507965 DDX60Q8IY21 1712 aaKnown RBP7.4□□□□□ -1.23
ATXN3-210ENST00000507965 PCNTO95613 3336 aa7.4□□□□□ -1.23
ATXN3-210ENST00000507965 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 KRTAP9-6A0A140TA67 174 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 FAM177BA6PVY3 158 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 KHNYNO15037 678 aaKnown RBP7.39□□□□□ -1.23
ATXN3-210ENST00000507965 SPATA31C1P0DKV0 1188 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
ATXN3-210ENST00000507965 CD33P20138 364 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-210ENST00000507965 STYK1Q6J9G0 422 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 FCHSD1Q86WN1 690 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 TNS4Q8IZW8 715 aa7.39□□□□□ -1.23
ATXN3-210ENST00000507965 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms