RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NME8Q8N427 588 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 SRPK1Q96SB4 655 aaKnown RBP8.76□□□□□ -1.01
CLCN3-206ENST00000507875 OSBPL3Q9H4L5 887 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 TOGARAM1Q9Y4F4 1720 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 KDM6AO15550 1401 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 ERVH48-1M5A8F1 160 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 XRCC5P13010 732 aaKnown RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 IBSPP21815 317 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 RAVER1Q8IY67 606 aaKnown RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 TSR2Q969E8 191 aaKnown RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 METTL14Q9HCE5 456 aaKnown RBP8.75□□□□□ -1.01
CLCN3-206ENST00000507875 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 KLK14Q9P0G3 267 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 BCAMP50895 628 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 MRFAP1L1Q96HT8 127 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 CRBNQ96SW2 442 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 PRR12Q9ULL5 1215 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 HEG1Q9ULI3 1381 aa8.75□□□□□ -1.01
CLCN3-206ENST00000507875 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-206ENST00000507875 DCTN1Q14203 1278 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 GPRASP2Q96D09 838 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 CSRNP1Q96S65 589 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 SLC52A2Q9HAB3 445 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 PDGFAP04085 211 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 FOXD4Q12950 439 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-206ENST00000507875 DDB1Q16531 1140 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 RNF187Q5TA31 235 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-206ENST00000507875 C20orf194Q5TEA3 1177 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 DEFB132Q7Z7B7 95 aa8.74□□□□□ -1.01
CLCN3-206ENST00000507875 THUMPD2Q9BTF0 503 aaKnown RBP8.74□□□□□ -1.01
CLCN3-206ENST00000507875 PTPRCP08575 1304 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 DDX56Q9NY93 547 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 DOT1LQ8TEK3 1739 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 CCDC194A0A1B0GVG4 234 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 BTBD11A6QL63 1104 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 EXOC5O00471 708 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 CYP27B1O15528 508 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 HNRNPLLQ8WVV9 542 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 API5Q9BZZ5 524 aaKnown RBP8.73□□□□□ -1.01
CLCN3-206ENST00000507875 SMC4Q9NTJ3 1288 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 SNTG2Q9NY99 539 aa8.73□□□□□ -1.01
CLCN3-206ENST00000507875 PXDNLA1KZ92 1463 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 HOXB1P14653 301 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-206ENST00000507875 EIF4A1P60842 406 aaKnown RBP8.72□□□□□ -1.01
CLCN3-206ENST00000507875 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 SSH1Q8WYL5 1049 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 PMM1Q92871 262 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 KLRG1Q96E93 195 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 FAM126AQ9BYI3 521 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-206ENST00000507875 LGR6Q9HBX8 967 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 C5P01031 1676 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 IBTKQ9P2D0 1353 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-206ENST00000507875 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 TRIM37O94972 964 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 C8orf58Q8NAV2 365 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 BCL9O00512 1426 aa8.72□□□□□ -1.01
CLCN3-206ENST00000507875 INHAP05111 366 aa8.71□□□□□ -1.01
CLCN3-206ENST00000507875 ZAP70P43403 619 aa8.71□□□□□ -1.01
CLCN3-206ENST00000507875 CABP4P57796 275 aa8.71□□□□□ -1.01
CLCN3-206ENST00000507875 INTS6LQ5JSJ4 861 aaKnown RBP8.71□□□□□ -1.01
CLCN3-206ENST00000507875 FANCLQ9NW38 375 aa8.71□□□□□ -1.01
CLCN3-206ENST00000507875 RPS6KL1Q9Y6S9 549 aa8.71□□□□□ -1.01
CLCN3-206ENST00000507875 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 BCAR3O75815 825 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 APBA3O96018 575 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 EIF4BP23588 611 aaKnown RBP8.71□□□□□ -1.02
CLCN3-206ENST00000507875 NASPP49321 788 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-206ENST00000507875 ALKBH2Q6NS38 261 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 ATF7IPQ6VMQ6 1270 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 ANKS3Q6ZW76 656 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 BPHLQ86WA6 291 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-206ENST00000507875 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-206ENST00000507875 STK31Q9BXU1 1019 aa8.71□□□□□ -1.02
CLCN3-206ENST00000507875 NHSQ6T4R5 1651 aa8.7□□□□□ -1.02
CLCN3-206ENST00000507875 TCERG1O14776 1098 aaKnown RBP8.7□□□□□ -1.02
CLCN3-206ENST00000507875 MYCP01106 439 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-206ENST00000507875 RASA3Q14644 834 aa8.7□□□□□ -1.02
CLCN3-206ENST00000507875 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
CLCN3-206ENST00000507875 FMNL3Q8IVF7 1028 aa8.7□□□□□ -1.02
CLCN3-206ENST00000507875 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
CLCN3-206ENST00000507875 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-206ENST00000507875 SCHIP1Q9P0W5 487 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-206ENST00000507875 ENPP3O14638 875 aa8.7□□□□□ -1.02
CLCN3-206ENST00000507875 DGKZQ13574 1117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms