RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL1A1-211ENST00000507689 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
COL1A1-211ENST00000507689 TRIM34Q9BYJ4 488 aa18.99■□□□□ 0.63
COL1A1-211ENST00000507689 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL1A1-211ENST00000507689 RNF186Q9NXI6 227 aa18.99■□□□□ 0.63
COL1A1-211ENST00000507689 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
COL1A1-211ENST00000507689 TM4SF4P48230 202 aa18.98■□□□□ 0.63
COL1A1-211ENST00000507689 AK9Q5TCS8 1911 aa18.98■□□□□ 0.63
COL1A1-211ENST00000507689 GOLIM4O00461 696 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 ATP5JP18859 108 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 GTF2A2P52657 109 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-211ENST00000507689 ERO1BQ86YB8 467 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 OTUD5Q96G74 571 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
COL1A1-211ENST00000507689 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-211ENST00000507689 USP5P45974 858 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 RHBDL3P58872 404 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 PPP4CP60510 307 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-211ENST00000507689 ZNF384Q8TF68 577 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-211ENST00000507689 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
COL1A1-211ENST00000507689 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 PAG1Q9NWQ8 432 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 PCDHB15Q9Y5E8 787 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 NDUFB9Q9Y6M9 179 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 MAST2Q6P0Q8 1798 aa18.96■□□□□ 0.63
COL1A1-211ENST00000507689 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
COL1A1-211ENST00000507689 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
COL1A1-211ENST00000507689 ZFPM1Q8IX07 1006 aa18.95■□□□□ 0.62
COL1A1-211ENST00000507689 OSBPL5Q9H0X9 879 aaPredicted RBP18.95■□□□□ 0.62
COL1A1-211ENST00000507689 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
COL1A1-211ENST00000507689 ECHDC1Q9NTX5 307 aa18.95■□□□□ 0.62
COL1A1-211ENST00000507689 HLA-DOAP06340 250 aa18.94■□□□□ 0.62
COL1A1-211ENST00000507689 MIGA1Q8NAN2 632 aa18.94■□□□□ 0.62
COL1A1-211ENST00000507689 TGFBRAP1Q8WUH2 860 aa18.94■□□□□ 0.62
COL1A1-211ENST00000507689 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-211ENST00000507689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL1A1-211ENST00000507689 DDX4Q9NQI0 724 aaKnown RBP18.94■□□□□ 0.62
COL1A1-211ENST00000507689 AKAP11Q9UKA4 1901 aa18.94■□□□□ 0.62
COL1A1-211ENST00000507689 MAGEB6P1A0A0J9YX57 407 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 ERC2O15083 957 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 CETPP11597 493 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 PPATQ06203 517 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 SNAPC2Q13487 334 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 IFNL1Q8IU54 200 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 CRACR2BQ8N4Y2 399 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-211ENST00000507689 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 HAUS7Q99871 368 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 PI4KBQ9UBF8 816 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 SUPT16HQ9Y5B9 1047 aaKnown RBP18.93■□□□□ 0.62
COL1A1-211ENST00000507689 RFX7Q2KHR2 1363 aa18.93■□□□□ 0.62
COL1A1-211ENST00000507689 DDTLA6NHG4 134 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-211ENST00000507689 INPP5BP32019 993 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 PPIL2Q13356 520 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
COL1A1-211ENST00000507689 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
COL1A1-211ENST00000507689 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 SNCAIPQ9Y6H5 919 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 ATRNL1Q5VV63 1379 aa18.92■□□□□ 0.62
COL1A1-211ENST00000507689 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 TBC1D12O60347 775 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
COL1A1-211ENST00000507689 TBC1D8O95759 1140 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 PDE6AP16499 860 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 CCL15Q16663 113 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 ADGRA1Q86SQ6 560 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
COL1A1-211ENST00000507689 CRNKL1Q9BZJ0 848 aaKnown RBP18.91■□□□□ 0.62
COL1A1-211ENST00000507689 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-211ENST00000507689 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
COL1A1-211ENST00000507689 HDAC1Q13547 482 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-211ENST00000507689 NOL9Q5SY16 702 aaKnown RBP18.9■□□□□ 0.62
COL1A1-211ENST00000507689 ANKRD45Q5TZF3 282 aa18.9■□□□□ 0.62
COL1A1-211ENST00000507689 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
COL1A1-211ENST00000507689 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
COL1A1-211ENST00000507689 FLT1P17948 1338 aa18.9■□□□□ 0.62
COL1A1-211ENST00000507689 ZNF532Q9HCE3 1301 aa18.9■□□□□ 0.62
COL1A1-211ENST00000507689 GJA5P36382 358 aa18.89■□□□□ 0.61
COL1A1-211ENST00000507689 FOXP4Q8IVH2 680 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-211ENST00000507689 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
COL1A1-211ENST00000507689 TTC41PQ6P2S7 1318 aa18.89■□□□□ 0.61
COL1A1-211ENST00000507689 DOCK2Q92608 1830 aa18.88■□□□□ 0.61
COL1A1-211ENST00000507689 IRF6O14896 467 aa18.88■□□□□ 0.61
COL1A1-211ENST00000507689 TTC6Q86TZ1 520 aa18.88■□□□□ 0.61
COL1A1-211ENST00000507689 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
COL1A1-211ENST00000507689 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
COL1A1-211ENST00000507689 OTOFQ9HC10 1997 aa18.88■□□□□ 0.61
COL1A1-211ENST00000507689 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-211ENST00000507689 GLRX3O76003 335 aaKnown RBP18.87■□□□□ 0.61
COL1A1-211ENST00000507689 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
COL1A1-211ENST00000507689 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
COL1A1-211ENST00000507689 ZFYVE28Q9HCC9 887 aa18.87■□□□□ 0.61
COL1A1-211ENST00000507689 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
COL1A1-211ENST00000507689 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
COL1A1-211ENST00000507689 PCNTO95613 3336 aa18.86■□□□□ 0.61
COL1A1-211ENST00000507689 PHF20L1A8MW92 1017 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms