RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 GUCY1A2P33402 732 aa25.53■■□□□ 1.68
SPCS3-203ENST00000507678 NTRK3Q16288 839 aa25.53■■□□□ 1.68
SPCS3-203ENST00000507678 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
SPCS3-203ENST00000507678 C8orf37Q96NL8 207 aa25.53■■□□□ 1.68
SPCS3-203ENST00000507678 SSRP1Q08945 709 aaKnown RBP25.52■■□□□ 1.68
SPCS3-203ENST00000507678 KRT23Q9C075 422 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 MROH7-TTC4A0A0A0MT08 1334 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 ZNF202O95125 648 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 PFKFB1P16118 471 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 WTAPQ15007 396 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
SPCS3-203ENST00000507678 SMARCC1Q92922 1105 aaPredicted RBP25.52■■□□□ 1.68
SPCS3-203ENST00000507678 CNNM2Q9H8M5 875 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 TAF1P21675 1872 aa25.52■■□□□ 1.68
SPCS3-203ENST00000507678 COL22A1Q8NFW1 1626 aaPredicted RBP25.52■■□□□ 1.68
SPCS3-203ENST00000507678 CYP2D7A0A087X1C5 515 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 A0A1W2PQ27 194 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 A0A1W2PQ64 194 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 A0A1W2PQD8 194 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 CEP57L1Q8IYX8 460 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 CLIC6Q96NY7 704 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 KCNJ14Q9UNX9 436 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 C4AP0C0L4 1744 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 C4BP0C0L5 1744 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 ERICH2A1L162 156 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 TPM3P06753 285 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 DYNLL1P63167 89 aaKnown RBP25.51■■□□□ 1.67
SPCS3-203ENST00000507678 DPCR1Q3MIW9 517 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 CCDC144BQ3MJ40 725 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 TBC1D9BQ66K14 1250 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 SGMS1Q86VZ5 419 aa25.51■■□□□ 1.67
SPCS3-203ENST00000507678 DHX40Q8IX18 779 aaKnown RBP25.51■■□□□ 1.67
SPCS3-203ENST00000507678 SRP68Q9UHB9 627 aaKnown RBP25.51■■□□□ 1.67
SPCS3-203ENST00000507678 DDX60Q8IY21 1712 aaKnown RBP25.51■■□□□ 1.67
SPCS3-203ENST00000507678 JAG2Q9Y219 1238 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 MAGEB6P1A0A0J9YX57 407 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 PRDM1O75626 825 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 KLRK1P26718 216 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 LIFRP42702 1097 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 PPARAQ07869 468 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 SART3Q15020 963 aaKnown RBP25.5■■□□□ 1.67
SPCS3-203ENST00000507678 AXDND1Q5T1B0 1012 aaPredicted RBP25.5■■□□□ 1.67
SPCS3-203ENST00000507678 TSC1Q92574 1164 aa25.5■■□□□ 1.67
SPCS3-203ENST00000507678 CAVIN2O95810 425 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 GNAT2P19087 354 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 ARID5BQ14865 1188 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 KIAA1468Q9P260 1216 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 SLC3A2P08195 630 aaKnown RBP25.49■■□□□ 1.67
SPCS3-203ENST00000507678 ATP2B1P20020 1258 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 SLC39A14Q15043 492 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 RTN1Q16799 776 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 FILIP1Q7Z7B0 1213 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 PHLPP1O60346 1717 aa25.49■■□□□ 1.67
SPCS3-203ENST00000507678 CAVIN4Q5BKX8 364 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 SPECC1Q5M775 1068 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 STAG1Q8WVM7 1258 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 MAP7D2Q96T17 732 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 UBAC1Q9BSL1 405 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 SPTLC3Q9NUV7 552 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 GNL3LQ9NVN8 582 aaKnown RBP25.48■■□□□ 1.67
SPCS3-203ENST00000507678 MINPP1Q9UNW1 487 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 BTBD18B2RXH4 712 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 TERF1P54274 439 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 NGLY1Q96IV0 654 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 PRDM10Q9NQV6 1147 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 TFCP2L1Q9NZI6 479 aa25.48■■□□□ 1.67
SPCS3-203ENST00000507678 PNPLA7Q6ZV29 1317 aa25.47■■□□□ 1.67
SPCS3-203ENST00000507678 SLC4A8Q2Y0W8 1093 aa25.47■■□□□ 1.67
SPCS3-203ENST00000507678 BARGINQ6ZT62 677 aa25.47■■□□□ 1.67
SPCS3-203ENST00000507678 CACTINQ8WUQ7 758 aaKnown RBP25.47■■□□□ 1.67
SPCS3-203ENST00000507678 ARAP2Q8WZ64 1704 aa25.46■■□□□ 1.67
SPCS3-203ENST00000507678 hCG_1642624A0A1W2PR95 340 aa25.46■■□□□ 1.67
SPCS3-203ENST00000507678 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.46■■□□□ 1.67
SPCS3-203ENST00000507678 ZHX1Q9UKY1 873 aaPredicted RBP25.46■■□□□ 1.67
SPCS3-203ENST00000507678 SYKP43405 635 aa25.46■■□□□ 1.67
SPCS3-203ENST00000507678 NAT10Q9H0A0 1025 aaKnown RBP25.46■■□□□ 1.67
SPCS3-203ENST00000507678 NPHP1O15259 732 aa25.45■■□□□ 1.67
SPCS3-203ENST00000507678 CMA1P23946 247 aa25.45■■□□□ 1.67
SPCS3-203ENST00000507678 CHAF1AQ13111 956 aaPredicted RBP25.45■■□□□ 1.67
SPCS3-203ENST00000507678 NRAPQ86VF7 1730 aa25.45■■□□□ 1.66
SPCS3-203ENST00000507678 RTL9Q8NET4 1388 aa25.45■■□□□ 1.66
SPCS3-203ENST00000507678 FMNL1O95466 1100 aaPredicted RBP25.45■■□□□ 1.66
SPCS3-203ENST00000507678 SHC4Q6S5L8 630 aa25.45■■□□□ 1.66
SPCS3-203ENST00000507678 CLEC4GQ6UXB4 293 aa25.45■■□□□ 1.66
SPCS3-203ENST00000507678 TRIM22Q8IYM9 498 aa25.45■■□□□ 1.66
SPCS3-203ENST00000507678 BSDC1Q9NW68 430 aaPredicted RBP25.45■■□□□ 1.66
SPCS3-203ENST00000507678 COL1A1P02452 1464 aaPredicted RBP25.45■■□□□ 1.66
SPCS3-203ENST00000507678 EVX2Q03828 476 aa25.44■■□□□ 1.66
SPCS3-203ENST00000507678 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.44■■□□□ 1.66
SPCS3-203ENST00000507678 FAM84BQ96KN1 310 aaPredicted RBP25.44■■□□□ 1.66
SPCS3-203ENST00000507678 DIS3L2Q8IYB7 885 aaKnown RBP25.44■■□□□ 1.66
SPCS3-203ENST00000507678 ZNF654Q8IZM8 581 aa25.44■■□□□ 1.66
SPCS3-203ENST00000507678 GNPATO15228 680 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 IFNAR1P17181 557 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 NR5A1Q13285 461 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 NBPF5PQ86XG9 351 aaPredicted RBP25.43■■□□□ 1.66
SPCS3-203ENST00000507678 RNF41Q9H4P4 317 aaPredicted RBP25.43■■□□□ 1.66
SPCS3-203ENST00000507678 TNKSO95271 1327 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 PTPAQ15257 358 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 C16orf45Q96MC5 204 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms